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Detailed information on CNT30692122

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30369939	Oryza sativa	Oryza glumipatula	94.31	99.47	98.58	564	forward
CNT30106030	Oryza sativa	Oryza longistaminata	97.32	98.64	93.3	582	forward
CNT30100598	Oryza sativa	Oryza rufipogon	96.15	93.19	99.83	575	forward
CNT30116169	Oryza sativa	Oryza nivara	96.15	99.14	98.96	575	forward

Expression of CNT30692122

Peptides detected in this lncRNA

>peptide 1 (31 aa)
PNPRRPPPPTPTRRWPSPLVPPAPSEAGRRT*

Sequence

>CNT30692122
CCCTAATCCACGACGGCCGCCGCCTCCCACCCCAACTCGTCGCTGGCCGTCGCCTCTAGTTCCACCTGCGCCGAGCGAGGCTGGGCGCCGTACGTAGGGG
CGCACCTCGCCATCGAGAGGATCTGAGGCCGTACGTCTGGATCTTCGATCTGCCCTTGTCGACACCAACATGATCGATCTCCACCTGTTCTCCTCGATCT
CTAGTCACCACCCTCCCCTTGGACTTAGATGAAGCTAGTTGGTGACAAAGCATTCCTCATTCCTTGAGCAAGAAGTGAATGGAAGTGATGCGTACTTAAA
ATGACATCATAAGAGAATCAATGGTGAGACAATGAGAACGGTGCATCTGAAGACAATACCTGCGAATGATGATGGGATCGAATGATAAAGGAATTGTCCA
CTGCACCTCCAATCACATATTTATAGATTGAGTGTTATAATTTTGATAGAAACTAAGATGTTAGTTCTGTTTGAAATACTTAGTTATTTAGTTGGATGTT
CCAAACAAATTATTATTATGTATTTCAATTGAATAAATTTGGTTGGTTGTGTCAGAATATATGGTGATAAGCATGCATGTTAATTCCTAGATGTGCAG