Detailed information on CNT30692114


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SZL7|FRS9_ARATH, E-value = 1e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184032Oryza sativaSecale cereale24.822.9688.35103forward
CNT30386364Oryza sativaTriticum turgidum24.822.685.44103forward

Expression of CNT30692114

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MLSLLWVLLMSAEKVFLPYTSAQCSLLSNSLSSHL

>peptide 2 (30 aa)
MLMMLAINFYFINLLCIATSTKEYVAIQCL*

Sequence

>CNT30692114
TTATTAATATCAAGCACCTTTAACGAATGAGAGCAAAGAATTCCAGCAAATTCAAACTTCTTGCAACTGCAGTTTTACTTCTGGTGCGAAAAATTTGACA
ACATGCTCATGATGCTTGCCATTAACTTTTATTTTATAAACCTTCTCTGCATCGCTACTAGCACAAAAGAATATGTCGCAATTCAATGTCTGTAGCACTT
GATCCTGGAAAATCTTGAACATTGCTGCAGTATAAACTCTTGATGCATGCCTCAATATATTTAGTTCTGCCTTCAATTTGGGAGTAGTTTGGGTTGCTTT
GAAGTCACATGCTTTCACTCCTCTGGGTACTACTCATGTCAGCGGAAAAAGTATTTCTTCCATACACTAGTGCCCAATGCTCTCTTTTGTCAAATAGTCT
TTCGAGCCATTTATT