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Detailed information on CNT30692007


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002720, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30575789Oryza sativaOryza barthii69.32102.3591.67348forward

Expression of CNT30692007

Peptides detected in this lncRNA

>peptide 1 (48 aa)
RFVSGLEFTTFGVKEELPRVIEAWVVLSVGRLPPCPPLDEGGVRWLRG*

>peptide 2 (38 aa)
PVCEWFGVHHLRSEGRTTPSDRGLGSPLRGPAPALPTP*

Sequence

>CNT30692007
CCGGTTTGTGAGTGGTTTGGAGTTCACCACCTTCGGAGTGAAGGAAGAACTACCCCGAGTGATCGAGGCTTGGGTAGTCCTCTCCGTGGGCCGGCTCCCG
CCTTGCCCACCCCTTGACGAAGGGGGCGTGCGGTGGCTTCGTGGTTGAGCGGTGGAGTTGGGCTCGCCTCAACGGGGAGTAGGAAACCGGCGAGTTTCCG
AACCTCGGTGAAAAATCTCTTGTCTCATTGTCTCATTTGATTGTCGCATTTACATTTGTGCAATTTACATTTCTAGAGACACACTTGAGATCATATCACC
CTAGGATTGCAAAACATTGACATAGGAGCGTGATTTACTTTCCTAGAGATATAATTGAGCCACTATCACCCTAGGTTTGCAAAACATAACTTAGTTGCTT
AGTTAGAGTTCACCCTCACCAAGCCTAGCAACTTAGGTTAGATTTGATTAGGTGTTATTTAGTTTTAAATCGCCTATTCACCCCCCCTCTAGTCGATATC
TC