Detailed information on CNT30691981


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677476Oryza sativaSetaria viridis18.6732.7689.4776forward
CNT30361989Oryza sativaSorghum bicolor29.9830.1281.97122forward
CNT30100849Oryza sativaOryza rufipogon23.5920.5110096forward

Expression of CNT30691981

Peptides detected in this lncRNA

>peptide 1 (32 aa)
KATQKLLCSHPDNQQSHHQVIHRSFTLPCILE*

>peptide 2 (97 aa)
RLPRNCCALIQTTNSLTTKSFTAVSRCHAYLSETLRFWWSENLGIGSELGGGEFEKAGPAQSSGRDGGDVEGLIDIALLRFFPWCGCDLGVFGSGEE*

>peptide 3 (31 aa)
KGYPETAVLSSRQPTVSPPSHSPQFHAAMHT*

Sequence

>CNT30691981
AAAGGCTACCCAGAAACTGCTGTGCTCTCATCCAGACAACCAACAGTCTCACCACCAAGTCATTCACCGCAGTTTCACGCTGCCATGCATACTTGAGTGA
AACACTGCGCTTCTGGTGGAGTGAGAACTTGGGTATCGGCAGCGAGCTGGGAGGCGGAGAGTTTGAGAAAGCGGGGCCAGCCCAGAGCTCAGGCCGGGAT
GGCGGAGACGTTGAAGGGCTTATAGATATTGCCCTGCTCCGCTTCTTCCCGTGGTGTGGCTGCGACTTGGGCGTCTTCGGCTCCGGGGAGGAGTAGGTGC
GCGCTGGGGGTGGAGGCGGGGATGGCAGGATGCCAATGCTGACGCTGGAGTGGAAGGCTCGGCAGTTGACAGCATTGAAGCCACGCATGGACTGGGGTGA
CGCGAAG