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Detailed information on CNT30691960


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 1e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678378Oryza sativaSetaria viridis23.9619.2488.8981forward
CNT30553103Oryza sativaOryza glaberrima100.8951.297.07341forward
CNT30439196Oryza sativaAegilops tauschii21.317.5688.8972forward
CNT30446343Oryza sativaSaccharum spontaneum26.3312.2392.1389reverse complement
CNT30361141Oryza sativaSorghum bicolor20.419.0291.369forward
CNT30369755Oryza sativaOryza glumipatula100.8955.997.07341forward
CNT30105287Oryza sativaOryza longistaminata102.0755.284.93345forward
CNT30100676Oryza sativaOryza rufipogon10048.0896.45338forward
CNT30575905Oryza sativaOryza barthii100.8954.7497.07341forward
CNT30593838Oryza sativaEragrostis curvula25.4411.6596.5186forward

Expression of CNT30691960

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MGRLRLMPRMSARPWMRLQHGCRGGVPSCTFISPFSTFAHTPSFS

Sequence

>CNT30691960
CGCAGATACATATGATGATTTGAACAAGGAACAAATTAGACATAGATAGATATATAGTTGTACGTGGCCTGGTGGTCGTTCTTCGTACGTTCTTGTGTGT
AGCAAGCAGTGAAGTAGAATGGAGCAGCAGCTATATTAGTTGCTGCACTGGAAGCCGGAGGGGACGGAGCGGCCGCAGTAGTTGACGAGGAGGCTGAGGT
TGATGGGGAGGTTGAGGTTGATGCCAAGGATGTCGGCGAGGCCCTGGATGAGGCTGCAACACGGCTGCCGCGGCGGCGTCCCCAGCTGCACGTTTATCAG
CCCATTCAGCACGTTCGCGCACACCCCCAGCTTCAGCG