Detailed information on CNT30691929


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552938Oryza sativaOryza glaberrima1008699.58479forward
CNT30100783Oryza sativaOryza rufipogon60.7581.74100291forward
CNT30575585Oryza sativaOryza barthii69.3173.2999.4332forward

Expression of CNT30691929

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MPRKRASGGRRSKHTLSISSKRYYQITRYQITVQDMYTRTNSDRSWMV*

>peptide 2 (38 aa)
MKSKRMPMLLDTPLPFLKAFLNPPDALMCSQTGSGQQQ*

Sequence

>CNT30691929
AATCACATAAGAGAACTTGGATAAAAGCTCTTTAAATTTACAGAAGGCAACAGAGATGAATTTATTGACGCTTGTACACTCAGAACGACGAAACACGGGC
TGATAGCAAAGCTACAACAAACGAAAATGCCAAGAAAACGTGCATCAGGAGGCAGGAGGTCCAAACATACATTATCCATCTCCTCAAAACGATACTACCA
GATCACCAGATACCAAATCACCGTACAAGACATGTACACAAGAACGAACAGCGATCGGAGCTGGATGGTGTAGAGAAGCGCTGAAGCGGTGGCGCCTACA
GAAAGTTCAGCACCAGGGCCCAGACAGGGTAGATGAAGAGCAAGAGGATGCCAATGCTGTTGGACACTCCGTTGCCCTTCCTGAAGGCGTTCCTGAATCC
ACCTGACGCCCTGATGTGCTCGCAAACAGGTTCGGGGCAACAGCAATGAGAAGGATCACAGCACCAGGCAGCTCTAACC