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Detailed information on CNT30691892


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596253Oryza sativaOryza meridionalis44.7914.0599.26271reverse complement
CNT30104233Oryza sativaOryza rufipogon38.6867.6398.72234forward

Expression of CNT30691892

Peptides detected in this lncRNA

>peptide 1 (61 aa)
ANPRKIPQIEQYGIRAELLATSGGKTLAGGGARAGAGRSGRRCGGDRWDSRGGGATYGDSC*

Sequence

>CNT30691892
AGGCTAACCCTAGAAAAATTCCCCAAATTGAACAATATGGTATCAGAGCCGAGCTCCTGGCGACCAGCGGCGGCAAAACCCTAGCCGGCGGCGGCGCTCG
TGCCGGAGCAGGACGAAGTGGAAGACGGTGTGGAGGCGACCGCTGGGACTCGCGAGGTGGCGGCGCGACCTACGGCGACAGCTGCTGAGCGGCGTGCCGG
GGTGGTCGGCCGGTCGCGCGACCGTGGCGTGGGGGCGACGGCGCAGGAGTGGTGGCGGAGCTGCGACCAGGAGAAGGGGACTGGGAGGAGGATTGGGACT
GGAGTCAGGCGTGATGGGTTGTGGTACATCAATCATGAGGAACTGGGACTAGCTGCGGTGGTTGGAGATGTTGAGAAGGAGATCAGTTTGCTTCACTGTT
AGTTAGGACATCCATCTTTTGAGATTTTGAGTAAGTTGTATCCAGACCTCTTTAGTAGAGTGGATAAGCATAGATTGGTGTGTGATGCTTGTGAGCTTGG
CAAACATACTCGCTCTACATATGTTGGAATTGGTCTTCGTAACTGTGAGCCCTTCATATTAATACATTCTGATGTTTGGGGACCATGCCCAGTTACTTCT
GTGAG