Detailed information on CNT30691790


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30498788Oryza sativaDigitaria exilis6.3720.9491.8449forward

Expression of CNT30691790

Peptides detected in this lncRNA

>peptide 1 (31 aa)
APIHSTSVNPVRFICVYFVSWEGTSFLFLGR*

>peptide 2 (49 aa)
MLVLALGDNNKPRSSEYLGGLANMIIDNDMVRSSGDDLASGSGGLVQQA*

>peptide 3 (48 aa)
MSAHAHPCCRKEHDDGIFLGLASDSIMGGGHAKIFLRVHRIQRGRCCL*

>peptide 4 (48 aa)
MLIHAAGRNTMTEFFLDSRVIRSWGEVMPKFFSGFIGFRGGGAASECN*

>peptide 5 (43 aa)
MGALHFLFSSLFCCWVCVFSVLAHLELSVVLLHTEMPVMAMII*

Sequence

>CNT30691790
GCACCAATCCATTCCACCTCCGTTAACCCCGTTCGTTTTATTTGCGTTTACTTCGTTTCTTGGGAAGGCACTTCCTTCCTCTTCCTAGGAAGGTAATAAA
GAAGAGCCTCCTCCTTCCTCCATGGATAGATAGATCAATGGGAGCTCTGCATTTCCTTTTCTCGTCTCTGTTCTGTTGTTGGGTGTGTGTGTTCAGTGTT
CTTGCTCACCTAGAACTGTCGGTGGTGCTGCTGCATACCGAAATGCCGGTAATGGCGATGATAATATGAGCGCTCATGCTCATCCATGCTGCCGGAAGGA
ACACGATGACGGAATTTTTCTTGGACTCGCGAGTGATTCGATCATGGGGGGAGGTCATGCCAAAATTTTTCTCCGGGTTCATCGGATTCAGAGGGGGAGG
TGCTGCCTCTGAATGCAATTGAGTGCACCTGAAACAGAAAAAAGAAAAAGAAACTCTGCTTCCTTTTTTTCTCTCTCTTCATGCTCGTTCTTGCGTTAGG
GGATAATAATAAGCCGAGATCTAGTGAATATTTGGGGGGTTTAGCGAACATGATCATCGATAACGACATGGTGAGATCTAGTGGTGATGATCTTGCTTCT
GGATCTGGGGGTTTAGTTCAGCAAGCCTGAAATTCTCACCTGGGTTTAAGGTTTCTTTTATTTTTCTTTTTTCATCAGATTGAAGTGGATAGAATGCTAG
ATCTAGTAATGTCCTATGATTGTTTCTCTTTCACCTGAATTTTTAAAAGCATTTTTGATGATTTCTCTC