Detailed information on CNT30691759


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT007312, E-value = 4e-112

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30106807Oryza sativaOryza longistaminata49.479.2897.48953forward
CNT30578420Oryza sativaOryza barthii14.6734.0188.69283reverse complement

Expression of CNT30691759

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MRCGVVFIKLSTKIFFGLQCYICEKIQLV*

>peptide 2 (63 aa)
MYEKILQFSHHLMSVVMALFFLQSIPPHYVSSIVLCDCYFSVNVHVCTNNCMSKHIIFTSKSC*

>peptide 3 (35 aa)
MMVICDGPQLEARLRYGMLSQTGLKLWPVIDRCHP*

>peptide 4 (31 aa)
MFCLPLLGRHRYFNTVFFMSVLSYLSYILIT*

>peptide 5 (55 aa)
MFQQGRTGMLFFFCTSIIPVFVFYNSAWFWNFLMTHPSGLIICFANMPTEFFIIS*

>peptide 6 (37 aa)
MRHTICSNRDALGCCFSSVQALFLFLFFTTLRGFGIF*

Sequence

>CNT30691759
CTAACATTTCGTCAGATGAAGAAATAAAAAAATAAAAGTTATAGATCTTGATGAGTTATTCAACTTTGTTGTTGATGACTTTTTCAATTGAAATCATTTA
GTATTTGAAAATGTTGTTTGAAGTTGTCATATTTTTAAATTCAAATTCAAACTGTTCAAAAAAAATGTTATATTGAAAAATGACCAAACTAAAAGTTGTA
AATATTGATAAGTTATACAACTTTGTTGTTGACATTTTTTCCATTTGAAATCATTTACTACCCGTAAAATTATTTTGCTATAGTCAACTTACAAATATAA
ACATTTCATATGAAAAATGGAAAAATAGTCATCGGTGACGGGCTTTAGTTAATGCCCGATAGAGATTAAGTATATAGCCTGTCACTGATGAGTCATCTGT
GACGGGCCTAGTTGTTATCTCAAACGGGCCTCAAGTTGGTGCACGTCACAGATGATGGTCATTTGTGACGGGCCACAACTTGAGGCCCGTTTGAGATATG
GAATGTTATCTCAAACGGGTCTAAAGTTATGGCCCGTCATTGATAGGTGTCATCCGTGACGGGCTTAAGTTTTATACCCATCTAATATGTCTGTGCGACC
ATATCTCAATCGAACACTTTTCGGCCCGATTGAGATGACTTCCTTGTGACGGCCCACTATTTCTAAGCATATTAGAGCCCGTCACAGATAGAAGGATCTG
TACTAGTGATTGGTCAACTAGCAAAAAAATCTCTCCATTGAAGATTTCAATATTGGTAAGAAATTTAGTGAACCACAATTACTACATTTTTAAATCAGTT
CAGACTATATATAACAAGCTAACATTTTTTTCTTCCTCCATAACCATTTCTAAGCTACTAATATTGAATATTTAATGGAACATTGATTCCATAGGTTAAC
GTTGTTTGCAGGGTGTTCCAATGACACTCAACTATTTACCCGAAAGAATTAAAGCCACAAGTACTTCTAAGTTCTAACATACGCAGTACCATCCTCGCTT
GATCTGTTAGTCCATACATAATGACAATACATATGTGCCACCCCAAAGGATCAAAGTCTTCATATCTCTAACTATATTGTGTGATTCTCTTGTGTGACAA
TACTACATGCACTTCAAACAATTTTAGATGAGACATACCATATGTTCCAACAGGGACGCACTGGGATGTTGTTTTTCTTCTGTACAAGCATTATTCCTGT
TTTTGTTTTTTACAACTCTGCGTGGTTTTGGAATTTTCTAATGACCCATCCTTCAGGATTAATTATTTGCTTTGCAAATATGCCTACAGAGTTTTTCATT
ATAAGCTGACTTCAAGATATGATTTCATTATTTTTTTTGTTTAATTGATTAAATGTTCTGTTTGCCCCTTCTTGGAAGACATAGATATTTCAATACGGTT
TTTTTTATGAGTGTTTTGTCCTACCTGTCATATATACTCATCACGTAGAAATATTATGGATGACATCCAAACATTGCCCTTAGACATGATTATGTAAGGG
CTACCTAAGTATTCAGTGGCAAGGAGGTACCACTTCATGTACTAAATTGTTGCAAGTACATTATGCGATGTGGTGTTGTTTTTATCAAGCTAAGCACTAA
AATTTTCTTTGGGTTGCAGTGCTATATATGTGAAAAGATTCAATTAGTTTAAGATGGAGATATGTATGAGAAAATATTGCAATTCTCTCATCACCTAATG
AGTGTCGTTATGGCATTGTTTTTTCTCCAATCAATACCCCCACATTATGTAAGCTCCATTGTCCTCTGTGATTGCTACTTTTCTGTAAATGTGCATGTTT
GTACAAACAATTGTATGAGCAAACATATTATATTCACATCTAAATCTTGCTGATATATAGTTGTAATGTGTATTCATATGCAAGTATGCTTCTCACATAA
TGCGTTTATATAATGTGTGGATATATAAT