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Detailed information on CNT30691748


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7Y0E8|NRX11_ORYSJ, E-value = 2e-160

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30132362Oryza sativaLolium perenne23.0717.5584.32185forward
CNT30361378Oryza sativaSorghum bicolor14.8429.7584.87119forward
CNT30579131Oryza sativaEchinochloa crusgalli45.8987.283.42368forward

Expression of CNT30691748

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MTRRDSKVCNSALAFAFSARISIFSAVKGNPSHAS*

>peptide 2 (28 aa)
MHSHKLNSIFRINFTRCCIKDDEVWNASH

>peptide 3 (56 aa)
MLINYVSNIVVQCLPIRTNQDKCRQASKLKITSQLLTHLVFLRDGKPRHACKTLIG*

>peptide 4 (36 aa)
MASQGMPAKLSLDNSSSLSKDTATTSNFSPTSLSFS*

Sequence

>CNT30691748
AGGCAGGAAGGCTCGGCATGGTCCGCACCATTTAGCTGAGAAGTAGAGGAGGACAGTCTTCCCAACAAGTTCTGATACAGGAACCTTCGCATTGAAATAG
CAGATCACAAAGTCCAAATCACCAATGACCAGAAGGGACTCCAAGGTCTGTAACTCTGCTTTAGCCTTTGCCTTCTCAGCAAGAATTTCCATCTTCTCTG
CAGTGAAAGGAAACCCTTCCCATGCATCTTGACCATGCTCATCAATTATGTCAGCAACATTGTTGTTCAGTGTCTTCCCATCAGGACCAATCAGGACAAG
TGTAGGCAGGCCTCTAAGCTCAAAATAACGAGCCAGCTTCTCACCCATCTTGTCTTCCTGAGGGATGGCAAGCCAAGGCATGCCTGCAAAACTCTCATTG
GATAATTCCTCATCACTGTCCAAGGATACAGCTACAACTTCAAATTTCTCCCCTACTTCTTTGAGTTTCTCATAAAATTTAGCAAGCAATGAGGTAAATT
GGACTACTGGGCCATAGCCATTCACCACAAAGCACAAACCAACGTACTTGCCCTCAAGGTCAGAGATGGGTACCTAGTCTCCCTTGTTCGAAAGTAAGTA
GTCGCGGGTGGGTGTACCAAGCACACTTTGAACAGTTTGATTATCCTTAGCTGCCTTTTCCTGTTCCTTCAATTCATTGATCCTCTCTGTTGTAAAAGGG
TAAGCTTCTGTACCATGCACAGTCACAAGCTCAACTCCATCTTCCGTATAAACTTCACCAGATGTTGCATTAAGGATGACGAGGTGTGGAATGCCTCTCA
CC