Detailed information on CNT30691743


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553047Oryza sativaOryza glaberrima47.6190.1697.94339forward
CNT30663373Oryza sativaTriticum dicoccoides11.5227.897.5682forward
CNT30136774Oryza sativaLolium perenne24.4447.4190.23174forward
CNT30345058Oryza sativaEragrostis tef15.5920.3391.89111forward
CNT30369762Oryza sativaOryza glumipatula61.3860.6199.08437forward
CNT30107199Oryza sativaOryza longistaminata34.2755.297.95244forward
CNT30575632Oryza sativaOryza barthii62.2294.2699.1443forward
CNT30115737Oryza sativaOryza nivara61.889.899.77440forward

Expression of CNT30691743

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MIPSGRRIPPGPHRRRTSGQLSADAVSRRTVTRPAPPRPLPPSSSLNRCTRNGASPMCRTISAID

Sequence

>CNT30691743
GTCATATGTTGTCATAGTACATGGGGCAATGCCTCGATGACAGGATGAATCGCTCCTCGTTGGAATAATCGAGGTAGCAAATTGCAAATTCGCAACCAAT
AATCTGTACAAATCCGCATTTGGGAGAAACCGGAACGAAAGAAAACAAAGAAAGAATCTGAATATGTTCTTCCGTTGCAATCTGCACGCTTCGTTTGCTC
TTCTTCACAGCAAGAATCGGACGCATCAAGGCCGGTAGCTTTAGTACATTAGTACGCCGCGGCGGCGGCGGTTGAGCCAGGCGTTGCGGAGCTGGAGCTC
GAGGGGGTCGCCGAAGCACTGCGCCCTGGCGAGGCAGAAGTGGGTGCAGAGCCCCGCCGGGGAGCGGACGCGGCAGGTGTCGAGCACGTAGCACGACGCG
CACTCCATCCCGCGGGCCTGCACCACCAGGCCCCACACCTGCCGCGCCGCCTCGGCGGCGCCGGCGCCGGCGGACGCGCCGCCCTCCTCGACCGCCGCGG
CGATCTGCTCGACCAGTATGATTCCGTCGGGACGCCGCATCCCGCCCGGGCCCCACCGCCGCCGCACGTCGGGCCAGCTCTCCGCCGACGCCGTCTCCCG
CCGCACCGTCACGCGCCCCGCGCCTCCCCGCCCGCTGCCGCCGTCGTCGTCGTTGAACAGGTGCACCAGGAACGGCGCCTCCCCGATGTGCCGCACGATC
TCTGCGATCGAC