Detailed information on CNT30691723


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596009Oryza sativaOryza meridionalis29.922.1798.7379reverse complement

Expression of CNT30691723

Peptides detected in this lncRNA

>peptide 1 (63 aa)
PPPISLLSPGDVPKLAGPAQIGGLRRAPAAPTAPAAPSPSPPYRCPRRTLAISPREVSAPLYL*

>peptide 2 (79 aa)
LPQFPSSPPATSPSSPAPPRSAASGAPPPLPRRPRPPPPRHRTAARAEPSPFLPARYPPPCTSSVNAFGRRVALWWWWW*

>peptide 3 (84 aa)
SPNFPPLPRRRPQARRPRPDRRPPARPRRSHGARGPLPLATVPLPAPNPRHFSPRGIRPPVPLVLMLLGGVWRCGGGGGERVGA*

Sequence

>CNT30691723
CCTCCCCCAATTTCCCTCCTCTCCCCCGGCGACGTCCCCAAGCTCGCCGGCCCCGCCCAGATCGGCGGCCTCCGGCGCGCCCCCGCCGCTCCCACGGCGC
CCGCGGCCCCCTCCCCCTCGCCACCGTACCGCTGCCCGCGCCGAACCCTCGCCATTTCTCCCCGCGAGGTATCCGCCCCCCTGTACCTCTAGTGTTAATG
CTTTTGGGAGGCGTGTGGCGTTGTGGTGGTGGTGGTGGTGAGCGCGTGGGCGCGTAAATAGGAG