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Detailed information on CNT30691704


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30603758Oryza sativaOryza punctata18.2239.6396.92195forward
CNT30550650Oryza sativaOryza brachyantha25.0516.9884.33268forward

Expression of CNT30691704

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLEEFRLGGSVLIVQFFLFISYARIARVTF*

>peptide 2 (37 aa)
MIEKACAPCSNGSREISIRSVIFHTTSPEEHTSSVPR*

>peptide 3 (70 aa)
MRITGPAHSPTETISHRPWRPAYHPHDFRSNSHASVKMCRFWATVFFVKPKSRELDTRFRLKYMATDPGS*

Sequence

>CNT30691704
TTGCCGAGACATCCATGTTAGCGACCCCGACCTGAGCTCAAGGCAACCACAAATCCGGCGCCGAGAACCATCCTGATACCGTATCTCCGGTTGCCAGATC
GAGCTGCTTCAGCACATCAACCTCACGGTCATGAGAATCACAGGTCCAGCTCATAGCCCAACTGAAACGATCAGCCACAGGCCTTGGAGACCAGCATATC
ATCCACATGATTTCCGATCCAATTCGCACGCAAGTGTGAAAATGTGCAGATTTTGGGCGACGGTCTTCTTCGTCAAGCCGAAAAGTCGAGAACTGGACAC
ACGTTTTCGTTTGAAATACATGGCTACCGACCCTGGAAGCTGACGAAACGGTGAGGATAATTAAGTACGAAAACGTGATCATGGTGTGAATTTGTACAGG
AACCTTGTTAGGTAGACATCAGATGAGGGAAGATATTTCAGGCACAAAATGTCAAGAGAGGTGATGAAGACTGATGGGCTGATGATGGTAGGAAAATTCG
GACGATAAAGAAATTCAGATGATTGAGAAGGCTTGTGCTCCTTGTTCAAATGGAAGCAGGGAAATTTCCATCAGGAGCGTGATATTCCACACGACTTCTC
CCGAAGAACACACCAGCTCGGTGCCTCGGTGAGTGGAAACTGGGTTCCATTGTGAAATAAAACTTTCTGATACCAATCAGGTTACTGCCGCCGGCGCACC
CTGTTTCCATTGAGCTGTTGTATTCCAGAACATCATCTTTACTCACCGGTAGTGTTTTCTGGCCTTCAGTGGATTGATGGTCCCCCTCCTCTTCAGTTGC
ATGATCAACTTTGTCCTTTCAATCTTCTCCTCAACAAAGTAGAGATTGTCCTAAAGTAGCACAGTTTCTACACCACTCATTCTCTCCCAACAATTTCCAT
GCTGGAAGAGTTCAGATTGGGGGGGTCTGTGTTGATAGTGCAATTTTTTTTGTTCATTTCCTATGCTAGAATAGCTAGAGTTACTTTTTAAGATATACTA
CATACTTAATTAATTTTAAGCTGGCTTTTGTAGAGTAAATGTGAAAGTCTATGTTGTATTGCAATCCCAT