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Detailed information on CNT30691621


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005030, E-value = 6e-99

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554733Oryza sativaOryza glaberrima25.6715.2997.67172forward
CNT30100351Oryza sativaOryza rufipogon52.8483.69100354forward

Expression of CNT30691621

Peptides detected in this lncRNA

>peptide 1 (58 aa)
AQNPPLGVLPTSGHKVGRGKPLLPPLSLPLLVLSFPHQAHLISPPQIPSNSSRSIPAC*

>peptide 2 (32 aa)
MSYTSCVVIALPRATRAMSDLLQLGSYPVGLP*

Sequence

>CNT30691621
GCCCAAAACCCACCCTTAGGCGTTCTCCCCACCTCAGGACATAAGGTGGGAAGAGGAAAACCCCTTCTTCCTCCCCTTTCACTTCCCTTGCTTGTTCTTT
CTTTTCCTCATCAAGCTCATCTCATTTCTCCTCCCCAAATCCCATCCAATAGCTCAAGATCAATCCCTGCATGTTAGACCACAACAATCCCCATCATCCA
AGCTTTCCATCCATCCCAACATAATGTGCAAGGAGAGTTGAGAGAGATCGAGAAGGAATAAAAGAGTGGTGGTTTCAGCCTGCAGGGCAGCAGCAGCATT
TTGTTTTCCTCCATTTGATCTAGTCGTTCTCGGGTCGTCATCGTGTTTGTTGTGTTGCCGGGCATCTCCAACGCCATCGCTGCTTCCTGGACCTCTCCGA
CCCCTTTCAGCTGCACGGAGAGGATTCCGGTTATGAGTTATACTTCTTGTGTGGTCATTGCTCTGCCGAGGGCGACGAGGGCAATGAGTGACCTCTTGCA
GCTTGGCTCTTACCCGGTTGGTTTGCCCTAGTGGGATTGTGGCACCACCGGTTTTATCTTTTGCTTATGAACTCTATTTGAGACTTCCGCTGCTATATTT
ATGTGTTGTATGTTGGGACCTTGGACCCTATTATGTGTCATGTACCTCACTGCACTTTAACCCTATTATG