Detailed information on CNT30691571


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184327Oryza sativaSecale cereale5.2361.587.02131forward
CNT30398990Oryza sativaTriticum turgidum5.1129.9186.72128forward
CNT30552615Oryza sativaOryza glaberrima96.4198.7398.672414forward
CNT30459409Oryza sativaSaccharum spontaneum5.5939.5591.43140forward
CNT30595788Oryza sativaOryza meridionalis24.8851.4593.9623forward
CNT30369516Oryza sativaOryza glumipatula96.6997.6299.382421forward
CNT30100164Oryza sativaOryza rufipogon26.9610099.26675forward
CNT30575434Oryza sativaOryza barthii100.2481.3699.42510forward
CNT30603626Oryza sativaOryza punctata68.4168.1187.271713forward

Expression of CNT30691571

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MDVRYSDRFSMCWVLFSEFVVVIRCSEITALYLGPMQSAKSLSCQKDVHGFSIICKLEDGLP*

>peptide 2 (46 aa)
MRGLQLLPTSSSEDSVLSDCAHILCAYSAPLRGVCWSSPVIGVGTIS

>peptide 3 (63 aa)
MLFSSNLYSIILHYHQMLLLPIQYSASSCIVHCFILFKVCLFLLMLRLRIARLLSSYALLLMH*

>peptide 4 (40 aa)
MLVFAYVEITNCSVTFVLCITVDALTEGDRLVLLPAPEHA*

>peptide 5 (39 aa)
MWDMRSTSASECYSCSVFSTYYSRLIWTNLSIQLTLVFV*

>peptide 6 (36 aa)
MLSDSHSSNISRCGICVAQVHQSVIVVQSSVLIILD*

>peptide 7 (36 aa)
MNIIPSAAVKFLCVDGLFLKVYIFYVYNCLSSLLVN*

>peptide 8 (35 aa)
MITCGFLASCAVAASSLLPPSAKSISKKRKSCQFP*

>peptide 9 (33 aa)
MAGTRGGFELLHMVAPSMRQQLHYLQERHKIIR*

>peptide 10 (33 aa)
MMSTVSNVNSGQIRFIPFWCLVSFCIFHERWHF*

>peptide 11 (33 aa)
MQRNYCAVSWTNAISEVLIVPKGCAWIFHHLQT*

>peptide 12 (31 aa)
MYPCCSGFVALQPFCLRYWHLLFRKPFSNSF*

>peptide 13 (30 aa)
MSVSLNYIHMINLETQYVAKNHTQLNHICI*

>peptide 14 (30 aa)
MSDGIFEPKIEGKRRISVGACYVLQFFETM*

Sequence

>CNT30691571
CGACGTGGCCGCCTGCGCGGCCACAACCCTCTCCCCGCGACGTAATTAAACTAATCCCCGCTTAACCCAAATCTTCCCCTCCTAATCCCTTTCGCCGCGC
TCCGTTCCCTCCCTCCTCTCGTCCCCTTCGCCAAAAAAGCCGAACTCCACTGCGCCAATTTTCCTGCCTTTTCTACCCCCCACTTGGAATTCTGGAAACA
TCGATTCGATCCTTCTAGACCCTTCTCCGCCCCCGTTTTAAAGTGCGCCGGCCTCCCACCCGTCGCTTCATCGCTCGCGGTCGCAGTCGCAGTCGCCCAC
ACCCTTGCCGCACCATGGCTGGAACCCGCGGCGGATTCGAGTTATTGCACATGGTGGCACCAAGCATGAGGCAACAACTGCATTACTTGCAAGAAAGGCA
CAAAATCATTAGATGATTACTTGTGGCTTTCTTGCAAGTTGTGCAGTTGCTGCCTCAAGCTTGCTGCCTCCCTCTGCCAAATCTATCAGCAAAAAAAGAA
AATCATGTCAGTTTCCTTGAACTATATACATATGATTAATCTAGAAACGCAGTATGTTGCCAAAAATCACACACAACTCAATCACATATGCATTTGAGAT
GAGGTAAAATGCTATCTGATTCACATAGTTCCAATATCTCAAGATGTGGGATATGCGTAGCACAAGTGCATCAGAGTGTTATAGTTGTTCAGTCTTCAGT
ACTTATTATTCTAGATTAATTTGGACCAACTTGTCAATTCAGCTGACACTTGTTTTTGTCTAGTGCTCCAGTAGCTTGGTTGTTTCATCATCATTAGACT
TTTAAACCTTTGGTCCTAAACTCCTAGCTGAAAAATTTGCACACTGAACTTCCCTGTGTTCTAAGGAAAAAAAAAATCTAGACATAACCTTGCTGATCTG
TATTATGGACTGGCCATTGGAGTGCATAATGCATAACTGCTGATCACTTTGTTGGCACAAAACTTACGCATAGACATAGGAGGTACTTATGTATAATTGT
ATCTTTAATCAGGACTTTGTTTTCAACCATTTTGTTGATATAACAGTTATACTGTAGTAATGATGAGTACAGTCTCCAATGTAAACTCAGGGCAAATCAG
ATTTATCCCTTTTTGGTGCTTGGTATCTTTTTGTATTTTTCATGAGCGATGGCATTTTTGAACCCAAAATAGAGGGAAAGAGAAGGATCTCTGTGGGGGC
ATGCTATGTACTACAGTTCTTTGAGACCATGTAGGTGTGGATGCTTGTTTTGACCTTTTCCTTAACATATAGAAAGAATAAACATTAAATAAATGATGAC
ATGGAAATGAAATTCATAAAGGAGTACATAAGCTAGTACTCCTGAAAATATCACTTCATATTCCCCCATGATTCAGTAACATGAATATCATACCATCAGC
AGCAGTGAAATTTTTATGCGTAGACGGTTTGTTTCTTAAGGTATATATTTTTTATGTTTACAATTGTCTGTCGAGTTTACTGGTCAATTGAGCAACAACG
GTACTTTTAACTGTTAATATCACTTGGTTTGCTATGTATCCTTGTTGTTCTGGCTTTGTTGCTTTACAGCCATTCTGCTTACGCTATTGGCATCTGTTAT
TTAGAAAACCATTTTCTAACAGTTTTTAGATTTCCTTTCGAGTCTCCAACTGTTTTTAACCTCCAAGTTGCCACATAATGCATAAATATACCGAGTAAGT
TTGCCCCCCTCTGAAATATGGATGTTAGATACTCAGACAGGTTCAGTATGTGTTGGGTGTTGTTTTCTGAGTTTGTGGTTGTCATAAGATGCAGCGAAAT
TACTGCGCTGTATCTTGGACCAATGCAATCAGCGAAGTCCTTATCGTGCCAAAAGGATGTGCATGGATTTTCCATCATTTGCAAACTTGAGGATGGCCTG
CCCTGATGCCCTCAGATGCTGATGAAGTGTGTGGTTCATGAAAACGTGAGAAGCTAAGTAGTGGAGTAACGGGAGTGAGTACCAGTGTGGCCACTATGAA
GAAAGTTAATTACTGAGAAATTAAGACTTGAGCATGTTATTTTCAAGCAACTTGTACAGCATTATATTGCACTACCATCAAATGCTTCTCCTGCCTATAC
AATACTCTGCAAGCTCTTGTATTGTACACTGTTTTATCTTGTTTAAAGTATGCTTGTTTTTGCTTATGTTGAGATTACGAATTGCTCGGTTACTTTCGTC
CTATGCATTACTGTTGATGCATTAACCGAGGGAGATCGACTAGTGCTTCTTCCTGCTCCAGAACACGCTTGATAATTGAGGAGTTTGCAGGGGCTTAGTT
AGATTATGGTTGGGCCCAGTGTCCTAATCTAGGAACCTGCAGCAATCTGCCCCCTTTGGCCCATGCGTGGCTTGCAGCTCTTGCCAACCTCAAGTTCAGA
AGATTCTGTACTATCGGATTGTGCGCATATATTGTGCGCATATTCAGCTCCTTTGAGGGGAGTTTGCTGGAGTTCTCCAGTTATAGGAGTTGGTACTATC
AGCA