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Detailed information on CNT30691537


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000468, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100490Oryza sativaOryza rufipogon10091.55100466forward

Expression of CNT30691537

Peptides detected in this lncRNA

>peptide 1 (29 aa)
DRELALASGTCTCTTALFSSLLAVVLHEF*

>peptide 2 (29 aa)
MMLGRVANRRRRYHCTGTLLDHGKSTLIH*

Sequence

>CNT30691537
TAGATAGGGAACTAGCGCTAGCTAGTGGCACTTGTACATGCACTACTGCCCTTTTCTCCTCTCTTCTAGCTGTTGTGCTCCATGAATTCTAACGTGGATT
CCCATCAGCCTTACACATGATGATCCTATGAATTCATTAACTAGCTGAGCAAGAGAGGGAGAGGAGAGAAAAAAGAAAAAAAGCACCGAAAAGTTGCAAA
TGATGCTAGGCAGAGTGGCGAACAGACGACGGAGGTATCACTGTACCGGCACTCTATTAGATCATGGAAAAAGCACACTCATACACTAGGTCTTCTTTAC
AAAGCCTAAGCAGCAAGCATATATAGTGTGTAGCTTAAGAATTAGTCGTAGTGTTGTTGTTTATGGAAAAGTCTAATTAACACCTAAAGTACTCAAGTAC
TGTATCGGTAAAGTATTAATAAGCTTAAGGTCGGTCTACTTGGCCGGCCCCGCCCTAATGGTATCC