Detailed information on CNT30691536


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369497Oryza sativaOryza glumipatula96.6799.1699.342119forward

Expression of CNT30691536

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MNIIPSAAVKFLCVDGLFLKVYIFYVYNCLSSLLVN*

>peptide 2 (36 aa)
MLSDSHSSNISRCGICVAQVHQSVIVVQSSVLIILD*

>peptide 3 (39 aa)
MWDMRSTSASECYSCSVFSTYYSRLIWTNLSIQLTLVFV*

>peptide 4 (43 aa)
SLLSSPSPKKPNSTAPIFLPFLPPTWNSGNIDSILLDPSPPPF*

>peptide 5 (46 aa)
MLFSSNLYSIILHYHQMLLLPIQYSASSCIVHCFILFKVCLFLLMLR

>peptide 6 (73 aa)
MAGTRGGFELLHMVAPSMRQQLHYLQERHKSLTPRPESSSPISCLQPCKRVISAVQEVPIYMPLQLSSVDMNH*

>peptide 7 (86 aa)
LPPLVPFAKKAELHCANFPAFSTPHLEFWKHRFDPSRPFSAPVLKCAGLPPVASSLAVAVAVAHTLAAPWLEPAADSSYCTWWHQA*

>peptide 8 (88 aa)
MQKSNLSSSRSPNLYATTALFCRHESLDDYLWLSCKLCSCCLKLAASLCQIYQQKKKIMSVSLNYIHMINLETQYVAKNHTQLNHICI*

>peptide 9 (62 aa)
MDVRYSDRFSMCWVLFSEFVVVIRCSEITALYLGPMQSAKSLSCQKDVHGFSIICKLEDGLP*

>peptide 10 (33 aa)
MQRNYCAVSWTNAISEVLIVPKGCAWIFHHLQT*

>peptide 11 (35 aa)
PSSRPLRQKSRTPLRQFSCLFYPPLGILETSIRSF*

>peptide 12 (35 aa)
MITCGFLASCAVAASSLLPPSAKSISKKRKSCQFP*

>peptide 13 (33 aa)
MMSTVSNVNSGQIRFIPFWCLVSFCIFHERWHF*

>peptide 14 (31 aa)
MYPCCSGFVALQPFCLRYWHLLFRKPFSNSF*

>peptide 15 (30 aa)
MSDGIFEPKIEGKRRISVGACYVLQFFETM*

Sequence

>CNT30691536
CTCCCTCCTCTCGTCCCCTTCGCCAAAAAAGCCGAACTCCACTGCGCCAATTTTCCTGCCTTTTCTACCCCCCACTTGGAATTCTGGAAACATCGATTCG
ATCCTTCTAGACCCTTCTCCGCCCCCGTTTTAAAGTGCGCCGGCCTCCCACCCGTCGCTTCATCGCTCGCGGTCGCAGTCGCAGTCGCCCACACCCTTGC
CGCACCATGGCTGGAACCCGCGGCGGATTCGAGTTATTGCACATGGTGGCACCAAGCATGAGGCAACAACTGCATTACTTGCAAGAAAGGCACAAGTCTC
TAACACCTAGGCCAGAAAGCTCCTCACCCATCAGTTGCCTACAACCATGCAAAAGAGTAATCTCAGCAGTTCAAGAAGTCCCAATCTATATGCCACTACA
GCTCTCTTCTGTCGACATGAATCATTAGATGATTACTTGTGGCTTTCTTGCAAGTTGTGCAGTTGCTGCCTCAAGCTTGCTGCCTCCCTCTGCCAAATCT
ATCAGCAAAAAAAGAAAATCATGTCAGTTTCCTTGAACTATATACATATGATTAATCTAGAAACGCAGTATGTTGCCAAAAATCACACACAACTCAATCA
CATATGCATTTGAGATGAGGTAAAATGCTATCTGATTCACATAGTTCCAATATCTCAAGATGTGGGATATGCGTAGCACAAGTGCATCAGAGTGTTATAG
TTGTTCAGTCTTCAGTACTTATTATTCTAGATTAATTTGGACCAACTTGTCAATTCAGCTGACACTTGTTTTTGTCTAGTGCTCCAGTAGCTTGGTTGTT
TCATCATCATTAGACTTTTAAACCTTTGGTCCTAAACTCCTAGCTGAAAAATTTGCACACTGAACTTCCCTGTGTTCTAAGGAAAAAAAAAATCTAGACA
TAACCTTGCTGATCTGTATTATGGACTGGCCATTGGAGTGCATAATGCATAACTGCTGATCACTTTGTTGGCACAAAACTTACGCATAGACATAGGAGGT
ACTTATGTATAATTGTATCTTTAATCAGGACTTTGTTTTCAACCATTTTGTTGATATAACAGTTATACTGTAGTAATGATGAGTACAGTCTCCAATGTAA
ACTCAGGGCAAATCAGATTTATCCCTTTTTGGTGCTTGGTATCTTTTTGTATTTTTCATGAGCGATGGCATTTTTGAACCCAAAATAGAGGGAAAGAGAA
GGATCTCTGTGGGGGCATGCTATGTACTACAGTTCTTTGAGACCATGTAGGTGTGGATGCTTGTTTTGACCTTTTCCTTAACATATAGAAAGAATAAACA
TTAAATAAATGATGACATGGAAATGAAATTCATAAAGGAGTACATAAGCTAGTACTCCTGAAAATATCACTTCATATTCCCCCATGATTCAGTAACATGA
ATATCATACCATCAGCAGCAGTGAAATTTTTATGCGTAGACGGTTTGTTTCTTAAGGTATATATTTTTTATGTTTACAATTGTCTGTCGAGTTTACTGGT
CAATTGAGCAACAACGGTACTTTTAACTGTTAATATCACTTGGTTTGCTATGTATCCTTGTTGTTCTGGCTTTGTTGCTTTACAGCCATTCTGCTTACGC
TATTGGCATCTGTTATTTAGAAAACCATTTTCTAACAGTTTTTAGATTTCCTTTCGAGTCTCCAACTGTTTTTAACCTCCAAGTTGCCACATAATGCATA
AATATACCGAGTAAGTTTGCCCCCCTCTGAAATATGGATGTTAGATACTCAGACAGGTTCAGTATGTGTTGGGTGTTGTTTTCTGAGTTTGTGGTTGTCA
TAAGATGCAGCGAAATTACTGCGCTGTATCTTGGACCAATGCAATCAGCGAAGTCCTTATCGTGCCAAAAGGATGTGCATGGATTTTCCATCATTTGCAA
ACTTGAGGATGGCCTGCCCTGATGCCCTCAGATGCTGATGAAGTGTGTGGTTCATGAAAACGTGAGAAGCTAAGTAGTGGAGTAACGGGAGTGAGTACCA
GTGTGGCCACTATGAAGAAAGTTAATTACTGAGAAATTAAGACTTGAGCATGTTATTTTCAAGCAACTTGTACAGCATTATATTGCACTACCATCAAATG
CTTCTCCTGCCTATACAATACTCTGCAAGCTCTTGTATTGTACACTGTTTTATCTTGTTTAAAGTATGCTTGTTTTTGCTTATGTTGAGATT