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Detailed information on CNT30691492


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SXF8|PIP13_ORYSJ, E-value = 5e-86

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519732Oryza sativaSetaria italica22.459.2381.76170forward
CNT30640394Oryza sativaNymphaea colorata22.7934.683.82173forward
CNT3020673Oryza sativaCitrullus lanatus22.6616.1880.81172forward
CNT30163276Oryza sativaPistacia vera11.5928.5785.2388forward
CNT30297885Oryza sativaTriticum aestivum57.1869.5586.41434forward
CNT30224613Oryza sativaHordeum vulgare13.738.3889.42104forward
CNT30394052Oryza sativaTriticum turgidum57.1830.3386.41434forward
CNT30564991Oryza sativaActinidia chinensis30.0456.4482.89228forward
CNT3084566Oryza sativaVigna radiata16.2120.8884.55123forward
CNT30435838Oryza sativaAegilops tauschii10.5432.1396.2580forward
CNT30658043Oryza sativaTriticum dicoccoides1747.0886.82129forward
CNT30463151Oryza sativaSaccharum spontaneum27.2741.1581.16207forward
CNT30131632Oryza sativaLolium perenne20.6971.6984.08157forward
CNT30232947Oryza sativaAnanas comosus24.2477.6486.96184forward
CNT30712987Oryza sativaMalus domestica golden10.0121.2989.4776forward
CNT30680472Oryza sativaTriticum urartu29.9132.5782.82227forward
CNT30340874Oryza sativaEragrostis tef7.9122.2288.3360reverse complement
CNT30595742Oryza sativaOryza meridionalis36.6384.2492.45278forward
CNT30573330Oryza sativaVitis vinifera9.0922.6286.9669forward
CNT30706529Oryza sativaPrunus avium31.8815.7380.17242forward
CNT30325169Oryza sativaAsparagus officinalis24.971.3280.95189forward
CNT30495761Oryza sativaDigitaria exilis1732.9185.27129forward
CNT30603734Oryza sativaOryza punctata52.3130.2494.21397forward
CNT30112244Oryza sativaFicus carica26.7530.7683.25203forward

Expression of CNT30691492

Peptides detected in this lncRNA

>peptide 1 (43 aa)
FSHQTYYVHIDIITATSDIYKRAYNYAAASFIDHQTVITHVVL*

>peptide 2 (46 aa)
MPPNDHAMPWIPTVAHLDADLFTPITVRMLMYRNRNVATNSAIPAR*

Sequence

>CNT30691492
ATTTCTCACACCAAACATACTACGTACACATAGATATAATTACAGCAACATCAGATATATATAAACGCGCTTATAATTATGCAGCGGCTAGCTTCATCGA
TCACCAGACGGTAATAACACACGTAGTACTGTAGAGACTTGATCCTCCATCATCTTGCAGCATCAACTCGGTTGATTATTTCAGAGTAATTATCGCTTAA
TTAAGATGATGGTGCATGGTAATTAATTAGTCCCGGCTCTTGAAGGGGATTGCTCTGATCACCACCACGTGGCACTGCATCGCCATGTAGAACACCGCCC
GCGTCAGCGACAGCTTCCGCGCCAGGAACAGCCCGAACGTCACCGCCGGGTTGATGTGCCCGCCGGAGATGCCGGCGGTGCAGTAGACGAGCGCGAAGAT
CATGCCGCCGAACGACCACGCGATGCCCTGGATCCCCACGGTGGCGCACTTGGACGCCGACTTGTTCACCCCCATCACCGTCAGGATGCTGATGTACAGG
AACAGGAACGTCGCCACGAACTCCGCGATCCCCGCCCGGTAGAACGACCACGACGTCAGCTCCTCCACCTCGAACACCGGCGCCGCCGGCGGCTCCCGGT
AGTCCTTCTCCTCCGCCCCCTGCGCCGCCGTCCCGATCGGCTGCCTCTCCGTGTACCTGTTCGCCCCCAGCCTCACATCCTCCTCCTTCCCCTCCATTAC
TATTAATTTGCCTCTTCTTCTTTCTACTACTCACTACTAGCTCTCTTGCCGGAGCCGGA