Detailed information on CNT30691471


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005371, E-value = 1e-142

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554675Oryza sativaOryza glaberrima76.1216.293.79290forward
CNT30110046Oryza sativaOryza longistaminata87.6685.8697.6334forward
CNT30100680Oryza sativaOryza rufipogon95.0189.3896.96362forward
CNT30117758Oryza sativaOryza nivara71.6595.4597.44273forward

Expression of CNT30691471

Peptides detected in this lncRNA

>peptide 1 (31 aa)
RVVSVVSEVRGREEKSSEDQSEEARSVVLLS*

Sequence

>CNT30691471
AGCGTGTAGTTTCCGTCGTTTCGGAAGTCCGCGGTCGCGAGGAAAAGAGTTCGGAAGATCAAAGTGAAGAAGCAAGAAGTGTAGTGCTTCTGAGTTGAAG
ACGAAGTTAGAAGACCAAGGCTCAGACCCCAGTTGAGTTTTGCCTGTGGAGTGGAGCTGAAGCCCCGCTAGGATCGCCTTTTTCCGCTGCTGCTGCTTTT
GTTTCGGTGCGAGGACTAAGTGCCTCTTTTGTAAGTATTTTACGCTTTATTTACGTTTGGAACTGTATATTACTTGTCGTTTTGTGTACCCTGGCTGGTC
CTGGACAGGGATTTAATACACAAAATAGTCTGGAAATTTGGGCTAAATTTCTGGGCGTGACAGCGACAGTGGCGACGAGGC