Detailed information on CNT30691469


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104980Oryza sativaOryza longistaminata5.3522.4489.1392forward

Expression of CNT30691469

Peptides detected in this lncRNA

>peptide 1 (44 aa)
NGRWEHKCCHGHLHVHSYVLQVIWLLGSKWVTGHCWHEALCCQY*

>peptide 2 (55 aa)
MKKMAHSLVHLPFRQCSKISNVATVKAMRHTGHQLGYLMIVHRNMNIPSQQFALT*

>peptide 3 (30 aa)
TADGNTNAAMDICMFILMFCRLFGCWVANG*

>peptide 4 (40 aa)
MNVPHNPTISGPGDWQVKGALTRSLQRSILCDCAITRSAC*

>peptide 5 (61 aa)
MLMNPDMCRFINIYINMDNTRKSYNMKREVFNRRNISCIRTHSALSLYFDGVIHHFAPKQR*

>peptide 6 (69 aa)
MVGLQVELYMLQSGVLYNQARCMGRGCIIAFIDTGTKINFLLVLLLTVQQCKGGQTVLIVNRQQGYKTF*

Sequence

>CNT30691469
AACGGCCGATGGGAACACAAATGCTGCCATGGACATCTGCATGTTCATTCTTATGTTTTGCAGGTTATTTGGTTGCTGGGTAGCAAATGGGTAACTGGTC
ACTGCTGGCACGAAGCATTGTGCTGCCAATATTAAGGAAATAACGAGTGCACCTGCTGTTAATTTTTCGTTCATAGATTTTGGTGTCAAAGTTAGGCTTA
TAATTCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGTCTATATTCATATAGATGTTAATTAATCTAGACATATATATGTGTCTAGATTCATTAACTT
CTAAATTAATATGAGTAACGCTAAAAAGTTTTACAATCTGAAACGGAGGGAGTATAATATAATTGTGTGCTCCAGTTGTTCTGCTTGGTAGTTTCTTTCT
GGAGTTTGCGAGATAGCTCATATTCTGTAGTTTACGAAAACCACGCTTCTCTTTGATTTCTGACTTAAGAAATATTGGGGGCAGTCTTAGAATGTACTTA
TCAATCAGCAATTTCCCTTCAAGCATGAGAGTTTCAGTATCATAATATGATAATATGGCATTCATGCGTCATGCGTGGTGGCCCTTATATTTTTAATTTT
GCTTCTTTTTTTTCCCACGCAGAATTGGCCTGAAGGCCTGAACATAACGTGCTACCTGTGGTTGACTGCTTGTACAGGGCTACTGTTGAACAACATGGTT
GGTCTGCAGGTTGAACTTTACATGTTGCAGAGCGGAGTTCTGTACAACCAAGCAAGATGCATGGGTCGTGGATGCATCATTGCATTCATTGACACGGGAA
CTAAAATCAACTTCCTGTTGGTGTTATTGCTCACCGTTCAACAGTGTAAAGGTGGACAAACCGTTCTCATCGTCAACAGACAACAGGGTTACAAGACTTT
TTAGCATTGCCTACATTCATATAGATGTTAATGAATCCAGACATGTGTAGATTCATTAATATATATATAAATATGGATAATACTAGAAAGTCTTATAATA
TGAAACGGGAAGTATTTAACAGAAGGAACATATCGTGCATAAGAACACATTCAGCCCTGTCATTATACTTCGACGGCGTTATACACCATTTTGCCCCAAA
ACAAAGGTGATGAAGAAAATGGCCCACAGTTTAGTCCACTTGCCTTTTCGCCAATGCTCCAAAATCTCCAATGTGGCAACAGTGAAGGCTATGAGGCATA
CTGGACATCAGTTAGGTTACCTGATGATTGTCCACCGTAACATGAACATACCGAGTCAGCAGTTTGCCCTGACATGAACGTGCCGCATAATCCGACCATC
AGCGGCCCCGGCGATTGGCAGGTCAAAGGAGCTTTGACGCGTAGCCTGCAGCGGTCAATACTATGCGACTGTGCGATAACAAGATCTGCATGCTAGGACT
AGGTATCTGGTAGGGGCAAGCAACAGCAACCGCCATATGTAGTGTAATCTTAAGGTGGGCTCTATGAATTGTGAATCATTGTTAGGGTATCACCAATGTA
TATTGCAAAGTGATCCATATAGATGTGACCCACGTAAATAGTTTTTACCTATAACAATCTCCACAATGTATATGTATACAAGGTATCATTAGGAGAAGAG
AGAGGAGTAGAGATAGATAATATAATTTATTCCATATGGGTAGTCCATATGCATATGGATACCTTTTGTTATTTTTTCTATATGGACTAGTTGCACAATG
GTAATAGATGGCTGAATGGA