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Detailed information on CNT30691398


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002896, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30115989Oryza sativaOryza nivara63.3374.5999.43872forward

Expression of CNT30691398

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MHGSYSCCSGDGSSCGSGSICSSSSNINMSSSNICSSTCEFSCVLYMC*

>peptide 2 (29 aa)
RHISKFFISSHIHYTVLLHTSNASHTLFV*

Sequence

>CNT30691398
TTAGACACATAAGTAAATTCTTTATTTCTTCACATATACATTATACAGTGTTGTTGCATACATCAAATGCATCTCATACATTATTCGTCTAAAATAGAAA
TAGTGAAAATTAAATAAAAATGTTGGTGTGATCTGTGACCACACCTAATTGCTTTAGGAGATTTCAAATATAAGATTTAGGCAAAAGAGAAAATTTAGAG
TTGCTTGATGTCACATATTTTGCAACCAAACCATTTTGGGGCACAAAATTTGTAACATTAGCCATCTCTTAGTACTTTCCAAAACTATTTATTTCTTAGG
TAAACTCTGAGTTTTTGGGCAATTGAAAATCAGTCCCTAAATTCAAAGTAATCTCCATATTTTTAAAGTCTATGGTACTATAATGCAAAAGTTACAAATA
TCATACTTTTCACTAGATTTTTATTTAATTGCAAATCTGTGAAAAATTATGCTGAGCCTCCACCGAATAAACCATGCTTAGGTGTCAAACAGGGAGACCA
CTAGTAAAACCTTAGTAGGTGAGTCACCTAGTAGTCAACCATGTCCATGTGACAAAAACCATATCAGTGTGAACCCCATCCTGACCGAGCCTCGTTTTCC
TCGTAGAGACCAAAACCAGTTAGCAAGAAGAACCACCATAACCAGAGAGTGGAGAAGAAAAGAAAAATACAAGAGGGCAAACTCACCCAACATTAGGTGG
AGCAGGGGCTCCAGCTCCATTAGGAGCAGGTACCCCAGCTCAAGGAGGAGACGCTGATTCAGTAGAATCAACCAACCAATAGAAGCTGCAGTAGAAAAAG
AGGAGTTCAACCATATATTTTCACAACCACTGAATAAGCCACAAAGAGAAGTTCGAGTTCCCGAGGAATCATTCATTTCGACTGAATCTGAGGGTATTTG
TGGTGTTTTCTATCCAGATGTTGAATCATTAGAATCTGTTGAACAAGAATATATGGCTGGAAGTGAAGGAACTCACGTTATGGATGACAACCAGGAAGGA
CTCTACGATGATGCTGAGATTGACTATGATAATTAGTATATAATATGCATGGTTCATATAGTTGCTGTAGTGGTGATGGTAGTAGCTGTGGCAGCGGTAG
TATTTGTAGTAGTAGCAGTAACATTAATATGAGTAGTAGTAATATCTGTAGCAGCACTTGTGAATTTTCTTGTGTGCTATATATGTGCTGAGTTTTTGGG
GTTTGTATATTATTTTGCTGTTATCGCTCGAGGCTTGTCTTGAGCTGTATCTATGGTACTGTAATAACCGGAACCAATGCGATGTTTCTGCTATGCTACT
CTGATGTGCATATCTCTGAGTAAACGGTGTTTATGAAGATATATGCTATAGACTTATATTCTACTCTTGTTGTGGAA