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Detailed information on CNT30691393


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003123, E-value = 1e-154

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225098Oryza sativaHordeum vulgare18.4324.4691.1868forward
CNT30253461Oryza sativaAvena sativa21.419.2187.3479forward
CNT30460356Oryza sativaSaccharum spontaneum32.2524.8484.87119forward
CNT30143360Oryza sativaLolium perenne20.058.3885.1474forward
CNT3066989Oryza sativaLeersia perrieri34.4212.3595.28127forward
CNT30106373Oryza sativaOryza longistaminata96.4830.3897.75356forward
CNT30584129Oryza sativaEchinochloa crusgalli20.3317.528875forward
CNT30603733Oryza sativaOryza punctata95.9366.7992.09354forward
CNT30556342Oryza sativaPanicum hallii23.315.4686.0586forward

Expression of CNT30691393

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MNVVLAATIAAPASWISSAVLDAAPRQPCRNFMGADDE*

>peptide 2 (49 aa)
IFFFLDFLAMDPPPAQAMNTDDFTDKTMDECCSCCYDCCSSILDFLCCS*

>peptide 3 (54 aa)
MLFLLLRLLLQHPGFPLLFLMLPLVNLAETSWVLTMSESEVSVIYFGLYKLLNS*

>peptide 4 (29 aa)
HIFFLGLLGDGSPTGSGDEHRRLHGQDHG*

Sequence

>CNT30691393
ACATATTTTTTTTCTTGGACTTCTTGGCGATGGATCCCCCACCGGCTCAGGCGATGAACACCGACGACTTCACGGACAAGACCATGGATGAATGTTGTTC
TTGCTGCTACGATTGCTGCTCCAGCATCCTGGATTTCCTCTGCTGTTCTTGATGCTGCCCCTCGTCAACCTTGCAGAAACTTCATGGGTGCTGACGATGA
GTGAATCAGAAGTCTCGGTGATATATTTTGGGCTGTACAAGTTATTGAATTCTTAGATTAATTCTTCCTCCCTTGCGTTGTAACTGAGATTTGTGCGTCA
CTTTATGGATGATTTTGGGAGGAAATTTGTGCACTATCAAGTTCTGAAACATCGATTTGTCTTCCAGCC