Detailed information on CNT30691392


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30101964Oryza sativaOryza rufipogon23.265.8886.36110forward

Expression of CNT30691392

Peptides detected in this lncRNA

>peptide 1 (51 aa)
FSVFYGSRDRQCMEESSIHAAASSIAVLRLRRLFHRAAPCPNPPRRPAVRD*

>peptide 2 (58 aa)
MALGRAVECPGRSDGKDGFTVVTTIMRQSTDSGETWHSKPKFAHVSNGMLRSIDLIVI*

>peptide 3 (54 aa)
IFRFLWISRSTMHGGEQYPRRRLLHSSSTPSSSLPPCSPLSQSSTAACGPGLKC*

Sequence

>CNT30691392
AATTTTCCGTTTTTTATGGATCTCGAGATCGACAATGCATGGAGGAGAGCAGTATCCACGCCGCCGCCTCCTCCATAGCAGTTCTACGCCTTCGTCGTCT
CTTCCACCGTGCAGCCCCTTGTCCCAATCCTCCACGGCGGCCTGCGGTCCGGGACTGAAGTGCTGACATCCAGTTTGCAGCGGCGGCGAGGAGGAGAGGC
GACGGTCATGGCGCTCGGTAGAGCAGTTGAATGTCCAGGGAGGAGTGACGGCAAGGATGGCTTCACGGTGGTGACGACGATAATGAGGCAAAGCACAGAT
TCTGGGGAGACTTGGCACAGCAAGCCAAAGTTTGCGCATGTTTCAAACGGAATGTTGAGAAGCATCGATTTAATAGTAATTTAGTTACTAAGAGACAATA
TGTTGTTGAACTATCAGTGTAATAGTAACTTGGTTACTATGAGAAACTTTGTGGCAAGATCAATATGTTATGT