Detailed information on CNT30691367


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000791, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553432Oryza sativaOryza glaberrima15.9467.0891.98324forward
CNT30370007Oryza sativaOryza glumipatula4.1839.3590.5985forward
CNT30101408Oryza sativaOryza rufipogon15.9468.3591.36324forward
CNT30576216Oryza sativaOryza barthii15.9971.7492325forward
CNT30116422Oryza sativaOryza nivara15.9468.591.05324forward

Expression of CNT30691367

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MLSKAGKHVSKQQVKNFWGACRRRFQTWTWLESMATGLGTNPYTGSIDASPEWWEAMEGVSPPFLFLFALPKPCVQT*

>peptide 2 (42 aa)
MEGTRRHLEKDLEPWRIIEVFTVKFGKPGVVIGLESASASKS*

>peptide 3 (98 aa)
MAARGTKRKFEAAEPLICSSPSSASPIDVGKLGEESVELELSEDSTKSYLFDAASGATAQDDVELVTRALSSVAAKSPEAVRQFIRRLTPEKVARSLD*

>peptide 4 (91 aa)
MLISTNGDVDITTSDTYNNPPTVIQKPISRARARQLNLEVSSFLCSSLYEFKNRLLPNDYIVISNNGGDKETLGERLRAMEDYRGVHSEIW*

>peptide 5 (29 aa)
MCLFPMRSTHGDCNDKYTNMSVVKCITSI*

>peptide 6 (30 aa)
MVMWTSLPRIHTTILQRSFKNRYQELVRDN*

>peptide 7 (36 aa)
SDTASSAKGRGVRSRRQRFQPRPGYAALIPAAVMQP*

>peptide 8 (37 aa)
MRVVKSSVVGFLLYSVKEIDLLKEAYPEETEFKENAA*

Sequence

>CNT30691367
ATCGGATACCGCATCGAGTGCAAAGGGGCGCGGCGTGCGCAGTAGGCGGCAGCGATTCCAGCCGCGTCCGGGCTACGCGGCATTGATTCCTGCTGCGGTC
ATGCAGCCTTGAAGGTTGTTTTGATCAATCGCTGCGTCGATCTCGTGGAAGACAGTCTGCATCGACGAGGCATTGGGCATCGAGGCATCGATTCCTGCTG
CGCTCGTGAAGCCTTGCAGGATGATTTGATCAATCGCTGCATCGATCTCATGCAATACAGTGGGTCTGCATCGACGACGGCCACATTCATTTCGAAAATG
CGCCATTGAAGAGCCGAGGCCTCCTATTTTAGAGACCCCTCGGTCGCAAATGGCTGCAAGAGGAACCAAGAGGAAATTTGAGGCCGCTGAACCTCTGATC
TGCTCCTCCCCTTCTTCGGCGTCGCCCATCGACGTCGGTAAGCTGGGAGAGGAGTCCGTGGAGCTGGAATTGAGCGAAGATTCGACCAAATCTTACCTCT
TCGACGCTGCATCCGGAGCCACTGCACAAGACGATGTGGAGCTTGTCACTCGTGCACTCTCCTCCGTAGCTGCGAAGTCCCCCGAAGCCGTCCGGCAGTT
CATCCGCCGCCTCACCCCGGAGAAGGTTGCACGCTCGCTGGACTAGGACCTCCTCGAATCGGACAAACTAAGAAAGGCCAAGATGCTGTCCAAGGCAGGG
AAGCATGTCAGCAAGCAGCAAGTGAAGAACTTCTGGGGTGCTTGTCGCCGCCGTTTCCAGACCTGGACATGGTTGGAATCGATGGCTACAGGGCTGGGAA
CAAACCCGTACACCGGCAGCATTGACGCCTCCCCAGAGTGGTGGGAAGCAATGGAAGGGGTTAGTCCTCCCTTTCTCTTCCTTTTTGCTTTACCGAAACC
ATGTGTTCAGACTTAGTTTCAGAACAAATAGTGCTGCAAATGTTAACTTAGTTTGACATGTAAATATTTAGATCTTAGTATTACATGCACATGGCAACTT
AGTTTTGAAACTTGCTTTGAGATGCAAATGTTCAGATTTTAGCATTAGATGCACATGCCAACTTAGTTTTAGATGCAAATGTTCAAACCTAGTATTATGT
ACATGGCAACTTAGTTTTGCAAGTTACATAGTCACATAGATATTTTAAATAGCTGTATTCAATATTTCAGATGTAAGCTTGTCAATTTGTTAAGTTAGCA
AGTGTGCTGTACAAATGTGCCTTTTTCCAATGAGAAGTACACATGGAGATTGCAATGATAAGTACACAAACATGTCAGTTGTCAAGTGTATTACATCCAT
TTAATTGGTAACCTCACAATGTGTTAGAATCATTGCAAAAGGGATTATTTCTTATTTACCATTTTTTAGCTGGGTCATCATGTTGATAAGTACAAATGGT
GATGTGGACATCACTACCTCGGATACATACAACAATCCTCCAACGGTCATTCAAAAACCGATATCAAGAGCTCGTGCGCGACAATTAAATTTAGAGGTGA
GCTCGTTCCTATGTTCTTCTTTGTATGAATTCAAGAATAGATTGCTACCGAATGATTATATTGTGATTAGTAACAATGGAGGGGACAAGGAGACACTTGG
AGAAAGACTTAGAGCCATGGAGGATTATCGAGGTGTTCACAGTGAAATTTGGTAAGCCTGGAGTAGTCATCGGCTTAGAGTCAGCATCGGCTTCGAAGTC
CTGAGATTAGCCGATGAGAGTTGTCAAGTCGTCAGTTGTCGGATTCTTGCTATATTCGGTTAAGGAAATTGATCTACTAAAGGAAGCTTATCCAGAAGAG
ACCGAGTTCAAAGAGAATGCGGCATGACAAGTTATCTATTAATTAGGAATAGTTTGTTAGTTTTCTTTTATCTTTAGGAAAGTGTGTTTAGTGTCCTATA
AGGACTTTATCTTTTCCTTTTATCTTTAGGAAAGTTTCTTTCTTGTCCGACAAGGACTTGTATCAACCCATAGGTATAAATATGTACACTCGGGGTCTAT
GTAATCTATCTTCACGATCAATACAATTCGGCG