Detailed information on CNT30691310


BLAST search results

BLAST vs Swiss-Prot:
sp|P85087|GLNA_VITSX, E-value = 1e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671311Oryza sativaSetaria viridis38.7840.1490.35114forward
CNT30296689Oryza sativaTriticum aestivum25.1714.0491.8974forward
CNT30225888Oryza sativaHordeum vulgare40.8223.1791.67120forward
CNT30552642Oryza sativaOryza glaberrima87.7640.3196.12258forward
CNT30250012Oryza sativaAvena sativa28.5714.5190.4884forward
CNT301731Oryza sativaZea mays28.5714.5192.8684forward
CNT30351207Oryza sativaEragrostis tef25.8511.6692.1176forward
CNT30364720Oryza sativaSorghum bicolor49.6623.0392.47146forward
CNT30369697Oryza sativaOryza glumipatula87.7642.23100258forward
CNT30100365Oryza sativaOryza rufipogon22.1110.9210065forward
CNT30575246Oryza sativaOryza barthii94.950.1888.89279forward
CNT30115740Oryza sativaOryza nivara84.6965.53100249forward
CNT3040612Oryza sativaMarchantia polymorpha22.116.6390.7765forward

Expression of CNT30691310

Peptides detected in this lncRNA

>peptide 1 (97 aa)
RDFLFFLFPFFFTSPSTNAIHQIVRSMEQPERHGELGRTMTRMSWRQEAASGLPDDGVDVGGLVPAGEPALVALAVGGDVLLVPELELLNGGLDDLVA

>peptide 2 (39 aa)
VIFFFFSFLFFLLLPAQMQFTRSSDQWSNRSDTASWGGR*

Sequence

>CNT30691310
CGTGATTTTCTTTTTTTTCTCTTTCCTTTTTTTTTTACTTCTCCCAGCACAAATGCAATTCACCAGATCGTCCGATCAATGGAGCAACCGGAGCGACACG
GCGAGCTGGGGAGGACGATGACGAGGATGTCGTGGCGTCAAGAAGCCGCTTCAGGGCTTCCAGATGATGGTGTTGATGTCGGCGGTCTCGTGCCTGCCGG
TGAGCCGGCGCTCGTTGCCCTCGCCGTAGGCGGAGATGTGCTCCTTGTGCCTGAGCTTGAGCTTCTCAATGGCGGACTTGATGATCTCGTAGCC