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Detailed information on CNT30691301

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002513, E-value = 3e-144

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30554761	Oryza sativa	Oryza glaberrima	45.3	34.56	94.68	357	forward
CNT30110501	Oryza sativa	Oryza longistaminata	48.35	91.81	96.59	381	forward
CNT30576235	Oryza sativa	Oryza barthii	45.94	57.28	95.3	362	forward
CNT30117596	Oryza sativa	Oryza nivara	45.43	51.81	98.6	358	forward
CNT30550979	Oryza sativa	Oryza brachyantha	9.77	25.08	85.71	77	reverse complement

Expression of CNT30691301

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MIGVRFHSRSRSPVDCLWHVNRALVLFCLPLLFSDSCWPALP*

>peptide 2 (36 aa)
MCVPTTDPGIGTDKYRRFPISKIGGRQTAYAASGFT*

Sequence

>CNT30691301
AACATATGCAGCTTCTAGGAGGTGAACGTTGATCAAGATTATATCAAGAATAAGAACTATCCTGAGCAGAGTGTTGAAGAGAAGCCCTTGTTAGTATGCT
TGCGTACCTAACAAGATGATCGGAGTGCGGTTCCATTCTAGGTCTCGTTCCCCAGTCGATTGCTTGTGGCATGTCAACCGGGCCCTTGTATTATTTTGTC
TTCCGCTGTTGTTCTCTGATAGTTGTTGGCCTGCCTTGCCCTAATGTAAGCATTTAACTCTCTTAGCCTGAATTCATTCATGATATGTTGTGATTTGGCT
ATGTATGTGTGTACCAACTACTGATCCAGGGATTGGTACTGATAAATACAGAAGATTTCCGATTTCCAAAATTGGAGGTCGACAGACGGCCTATGCTGCT
TCTGGATTCACCTAGGCACGAGAGGGGCCTACCCGACTTGGCTTAAGGAGGGGGTGAAACCTGAGGTGTGTAGTGCGATTGGTTAGGGGGAGTTACCATT
TCCCCCTTTGCAGTATCATCGTGGTACTTCAAGGCAGAATTTTTTTGAGAATTAATATTATTTTTATGGAAAATCGCAAAACTAGTGGCCACCTGTGGAA
AATCGCAAAAATGGGGTCCTGTCGAATAGGTGCAGTTCGATAGGCGCCTTATCGAACGGGTGGACCGCGATAGAAGAGGGGTAGTTCGACTGGCGCCTTG
TCGAACAGGGGCAGTTCGACAGGTAGCAGTCGAATAGCGTTGGTTCGATAGGATCCCTGTCGAACAACTGTTCTTCGACTTGTCCTCA