Detailed information on CNT30691164


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30603684Oryza sativaOryza punctata79.2971.6791.41291forward

Expression of CNT30691164

Peptides detected in this lncRNA

>peptide 1 (85 aa)
PKSPIICNGRTDSSFCSKGTPICQFHIPHNPYTHPSSCPPHLLQPQHARTRVPSRSQTAKNESPNHGAQELILVLRRSAEFGDLA*

>peptide 2 (70 aa)
PNLQSYATDGQTAHSAAKGHQFVNFTSPTTHILTHHLVPLICFNPSTHALVCPLDHKLQKMSPPIMARKN*

>peptide 3 (60 aa)
QISNHMQRTDRQLILQQRDTNLSISHPPQPIYSPIILSPSFASTPARTHSCALSITNCKK*

Sequence

>CNT30691164
CCCAAATCTCCAATCATATGCAACGGACGGACAGACAGCTCATTCTGCAGCAAAGGGACACCAATTTGTCAATTTCACATCCCCCACAACCCATATACTC
ACCCATCATCTTGTCCCCCTCATTTGCTTCAACCCCAGCACGCACGCACTCGTGTGCCCTCTCGATCACAAACTGCAAAAAATGAGTCCCCCAATCATGG
CGCGCAAGAACTGATTCTAGTTCTGCGACGATCAGCGGAGTTTGGCGATCTAGCTTGATTACTCCTGCAGCTCTGCTTCTGGGCTTTAATGGTTCCTAGC
ACAACATTCCATGTAGATTTGTTTTCATGGCTGCCCTTTTTTACTCCTCCCTTTCCCTCTCCTTGAT