Detailed information on CNT30691127


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003128, E-value = 1e-145

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100537Oryza sativaOryza rufipogon45.4140.26100188forward

Expression of CNT30691127

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MPMFPAPMVFDPITSVTDNLYADGMLQIMSPLLTAIV*

>peptide 2 (41 aa)
ALIGDFGGQSPSLISLLFKFPKCIQPLCTRWHLIIRESDTN*

Sequence

>CNT30691127
GCTCTGATTGGCGACTTTGGTGGGCAAAGCCCTTCTCTAATATCCTTATTGTTTAAGTTTCCAAAGTGTATACAACCTCTATGTACTAGGTGGCATCTAA
TAATTAGGGAATCTGACACAAACTAGGAATATCAAATAGAATACATAAATCAAGCTAGGACTAGAATTATGAACATATCTAACGCACCATGCCAATGTTT
CCTGCACCTATGGTATTTGATCCCATAACATCCGTAACAGATAACCTGTATGCAGATGGAATGTTGCAAATCATGAGTCCTTTACTGACAGCAATTGTCT
AGGAGAAAATTCTAGTTAGTGTTGCAGAAAATTAGGTGCCTCTTTGCCAGCAAATTCGACCTTTGATGCCATCATTGTTGGTGTAGCAGAAATAATGTCA
TCAATGTTCAATGC