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Detailed information on CNT30691044


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002760, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369658Oryza sativaOryza glumipatula26.9710096.8219forward
CNT30109832Oryza sativaOryza longistaminata23.7758.8494.82193forward
CNT30575314Oryza sativaOryza barthii41.6333.4397.63338forward
CNT30115936Oryza sativaOryza nivara51.9755.0299.29422forward

Expression of CNT30691044

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MQYRAQPISHRVSLFASSMSNIAHMNTSAYLHTHLHVSSPSIRIKEFYG*

>peptide 2 (42 aa)
CPYLIMAFRYRLFLIFVTVEIVVLIVRSTASDFRSGSSGIAG*

Sequence

>CNT30691044
CTGCCCCTATTTGATCATGGCTTTTAGATACCGCCTGTTTCTTATATTCGTGACGGTGGAGATCGTTGTGCTTATTGTCCGAAGCACAGCATCAGATTTT
CGGTCAGGTTCATCAGGGATAGCCGGATAGAACTATCTGAGATGAAATCATCTCGGACGGGTTTTGTTCAAGGATATTAAACTTTTGAGGTCAAGTCCGA
TATGCAACGCATGTCCATGCTGCCCATGCAAATGCTGATCATTACCATGTCGTCGTTGTTCTCTTCGTAACCGCATTGATCAAATTCAATTGTTTTGATG
TTTTGTATTTCCTCATCAGGTTCTATTTTGTAATATACCAATTCAGAAGCACATACATGTAGTACAATTCAACACATCAATCAATGGCTTACCATCAGCT
GATAACAACCAAAACCGTACCCTTTTTTTTCTCTTTTTTTTAAAATTTTTTTAGGCTCTTCAAGTTATCCCTTCTTTCTATAAAGTTAAGGCCAAAAGCT
CAAACCTTGTGCTTTCACGTCATCATCAAATTGTGAACCGTTGGATGAATGTATTAGATTGCTTCTCAGACGTTGGATGGAATGCAGTATAGAGCCCAAC
CCATCAGTCACCGAGTGAGTCTCTTCGCCTCCTCAATGTCAAATATAGCCCACATGAACACATCGGCCTATCTCCACACACATCTACATGTATCCAGTCC
GTCAATCCGTATAAAAGAGTTTTATGGCTGAACGCTCCTTCAGTTGATATGTGCTACCTAAATTATCTATAAATTTTTGATAGGGCTGCTAAAAAAAATT
CTCCAAGAAATC