Detailed information on CNT30690882


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553865Oryza sativaOryza glaberrima54.7277.2595.94197forward

Expression of CNT30690882

Peptides detected in this lncRNA

>peptide 1 (93 aa)
LRRRRRLPSPPVGAPRGGEARPPVPLHRRPPELRRRRRPSRRRRPPRRRPSSFVVWLEVSDVPEESVSVEEGSEAFAEAQEDEYLSEGDDLED*

>peptide 2 (68 aa)
SPSPPLAVAARRCAKGWRSPAACPPSPPATGAPPSPPTEPPPPSTSSPAIIVRRLARGFRRSGGERFR*

Sequence

>CNT30690882
CTTCGCCGTCGCCGCCGCTTGCCGTCGCCGCCCGTAGGTGCGCCAAGGGGTGGAGAAGCCCGGCCGCCTGTCCCCCTTCACCGCCGGCCACCGGAGCTCC
GCCGTCGCCGCCGACCGAGCCGCCGCCGCCGTCCACCTCGTCGCCGGCCATCATCGTTCGTCGTTTGGCTCGAGGTTTCCGACGTTCCGGAGGAGAGCGT
TTCCGTTGAGGAAGGTTCCGAAGCGTTTGCGGAAGCCCAAGAAGACGAGTATCTCAGTGAAGGTGATGATCTGGAGGATTAGGCTTGTTCTTGGTTAAGA
TGCCTGTGGAGTGGAGTCGCCATAGCTGTTCCGTAGTTTGTTATAGTTTTATTTCCGCTG