Detailed information on CNT30690858


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100344Oryza sativaOryza rufipogon74.115.16100206forward
CNT30575460Oryza sativaOryza barthii10018.4599.64278forward
CNT30115810Oryza sativaOryza nivara10019.1199.64278forward

Expression of CNT30690858

Peptides detected in this lncRNA

>peptide 1 (57 aa)
PLLMPLPAAALHRSIRLRATVLLIKLCMYVYLVRTHSALALELARLLDKNNTIWYWK*

Sequence

>CNT30690858
CCATTGCTGATGCCATTGCCTGCTGCTGCTCTGCATCGATCGATCCGTCTTAGAGCTACCGTGCTGCTAATTAAGCTATGTATGTATGTATACCTCGTTC
GTACCCACTCTGCTTTGGCTTTGGAGCTAGCTAGATTATTAGACAAGAATAATACTATATGGTACTGGAAATAATAATTATTAATTGTACGTATGTAGTA
TGTATAGCACCAGCAGCATGCGGCTGGTAGTGGCGATCGAGAAGAGAGAGCTGGATAATACTACATTCATTCATGACT