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Detailed information on CNT30690840


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENG6|RBL_ORYNI, E-value = 0.0

BLAST vs NONCODE:
NONMEST005601, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678415Oryza sativaSetaria viridis19.3583.8691.72894forward
CNT3019929Oryza sativaCitrullus lanatus5.3757.1490.32248forward
CNT30629265Oryza sativaVigna unguiculata10.1141.2588.44467forward
CNT30201083Oryza sativaPisum sativum26.6357.6186.11230forward
CNT3047368Oryza sativaPrunus dulcis3.4621.7182.5160forward
CNT30183103Oryza sativaSecale cereale31.4890.2595.671454forward
CNT30290424Oryza sativaTriticum aestivum31.8792.0695.581472forward
CNT30225281Oryza sativaHordeum vulgare6.9996.4295.36323forward
CNT30565170Oryza sativaActinidia chinensis22.6291.5188.81045forward
CNT3089355Oryza sativaVigna radiata9.7675.6783.37451forward
CNT30541452Oryza sativaBrassica napus30.8185.3686.861423forward
CNT30239038Oryza sativaBrassica oleracea13.9451.6486.18644forward
CNT30554212Oryza sativaOryza glaberrima29.0335.5599.931341forward
CNT30146680Oryza sativaMedicago truncatula11.1541.186.6515forward
CNT30434683Oryza sativaAegilops tauschii9.7475.6396.22450forward
CNT30257373Oryza sativaAvena sativa14.2999.496.82660forward
CNT3060115Oryza sativaArabidopsis lyrata24.0746.986.511112forward
CNT30265852Oryza sativaBrassica rapa2.122.285.5797forward
CNT3017995Oryza sativaZea mays27.7582.9895.791282forward
CNT30606537Oryza sativaGossypium raimondii15.3742.2481.69710forward
CNT30227829Oryza sativaAnanas comosus3.6635.9686.98169forward
CNT30682029Oryza sativaTriticum urartu18.5181.0495.79855forward
CNT30477828Oryza sativaArabidopsis halleri8.173.4888.5374forward
CNT30622174Oryza sativaCajanus cajan8.3653.0286.79386forward
CNT30595572Oryza sativaOryza meridionalis8.4245.3998.2389forward
CNT30355674Oryza sativaLactuca sativa12.8480.3587.18593forward
CNT30369217Oryza sativaOryza glumipatula7.452.8699.12342forward
CNT30480921Oryza sativaChara braunii4.0924.8783.6189forward
CNT30434475Oryza sativaPapaver somniferum6.7380.9989.39311forward
CNT3058691Oryza sativaAmborella trichopoda7.1473.8387.58330forward
CNT30323690Oryza sativaAsparagus officinalis11.8221.486.45546forward
CNT30121217Oryza sativaCitrus clementina17.9992.6487.12831forward
CNT30149719Oryza sativaBrachypodium distachyon3.2766.2395.36151forward
CNT30103728Oryza sativaOryza rufipogon25.14100.0999.221161forward
CNT30578317Oryza sativaOryza barthii6.4561.5795.64298forward
CNT30726954Oryza sativaLupinus angustifolius11.7820.4884.38544forward

Expression of CNT30690840

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MDYINNKKIAKKEKQLKRFDFSFPISRPFYPSNRT*

>peptide 2 (35 aa)
MKTFSVNTAYLIPLSYDNTLFVFIYCIIPLYLLNI*

>peptide 3 (35 aa)
MRLFRIQNLFRLLPSTCNTYSTTLGPHKSAVRIDT*

>peptide 4 (31 aa)
MGGMLKLMNMFHSYNMFHSYIMGTPCVHSML*

>peptide 5 (31 aa)
MSSFLKESLRKGSNFQTLSFFIHSPLVFFSI*

>peptide 6 (29 aa)
MTLAFRRILVSCSEVLLVRPRAKMDYIRI*

>peptide 7 (39 aa)
MRGKGGKIAYSIKGQILLPTTDLILPLRLCKAIYHPQRV*

>peptide 8 (30 aa)
MDKLHKRYIDYPPQQRARCDSIGLCNDQDW*

>peptide 9 (42 aa)
MEFRESMILIIRSLLNVSTMGPDSIAVQSEMKDFSLLIGVVN*

>peptide 10 (44 aa)
MILCGNTLRKFGPVGSRQSYFSAHKEIKKPLQLPEILSLLKARK*

>peptide 11 (55 aa)
MKIPDDLSFSTNPRLVQRSPVSKTPRKNGLYKNIIPNILRVRIVALRFRIFFLCE*

>peptide 12 (51 aa)
LSDENGRILRHISHLDKLEAIFSYPHLFLPLDKYSKSPYNNAISKGPFPSC*

>peptide 13 (91 aa)
MQFRRDLFPRVEKTFLLPILLHSIHFKKFNWYSKYFHWYAQEISQFGSFLFNFSWSKKLLISTSQGNGPLAPDFHIKDTTRKKTFFNLNSN*

Sequence

>CNT30690840
CTTTCGGATGAAAATGGAAGAATATTACGCCATATATCCCACTTGGACAAATTAGAAGCAATTTTCTCTTATCCTCATTTGTTCCTTCCTTTAGATAAAT
ACTCAAAATCCCCTTACAATAATGCAATTTCGAAGGGACCTTTTCCCTCGTGTTGAGAAAACTTTTCTTCTTCCAATTCTTCTTCATTCAATTCATTTCA
AAAAATTCAATTGGTACTCAAAATACTTCCATTGGTATGCGCAAGAAATAAGCCAATTCGGCAGCTTTTTGTTCAATTTCTCGTGGAGTAAAAAACTTCT
CATCAGTACGAGTCAAGGGAATGGCCCCCTGGCCCCGGATTTCCATATAAAGGATACGACGAGGAAAAAGACCTTCTTTAACCTGAATTCTAATTGATTG
GATATCCCGCATAAGGAATCGAAGAAAGACGCGACGTTTTATTCCAGGGAATCCCCAACGAAAAATGCACACTACTCCCTCTTTTCTATCGAATCGGTCA
TAACCACTGCCTACATTCCACAAAATAGTGCACCACAAGTAAGCGCTAATGAATAGGCCTGCGATTCCGTAGAAAGACATCACGACCCCCTGTGGAAAAA
AAAGAATTTGTTGAGATGGAAGTACAGATATAATATTCTTACCAAGATAACTGGAAGCCCCAACCGCTAAGAATCCTAGTGAACCTAGAAAAAGAATACA
GGCCCAGAAAAAATTACCTCTTTTTCGAGAACCTTTTAGAAGTTCTATCCATATGTGTTCTGATCGCCAATTCATATTAGATATACTAACAGCGGTCGAT
TGAAATTGAGAGAATAAGCTAAATGATTTTGACTTTACTTTTTTTGATTCTGAAATCGCCTTCGCCAACTAGATACTCCTGTAAAATAATTGGTTAGATA
CATTGACTTTCTATTCAAAAAGTATTTGTTGATCCACTTAAAAAAACTCGCTATACCCGGTTCCGCATATGCATGCATTTATGCTCGTAGCCTATATCCG
CATCCATAATCCCCATCCATAGCGGGTTTGCATTTGTGTGTAGAAAGAGCCACATAACATACCATATTATATTACTTACACTACAAAAGATCCGTATTAT
GATCCTGTGTGGAAATACATTGAGAAAATTCGGTCCCGTCGGTTCTAGACAATCTTATTTTTCTGCACATAAAGAAATAAAGAAGCCATTGCAATTGCCG
GAAATACTAAGCCTACTAAAGGCACGAAAATAGAGGGTAAGTTAAAATCCATCATAGAATAGGTGTCTCCATTCAAATTTACTATTTCTATCTATTCGAT
TTGATCTATTCAAAAAATATCTTAAGATTCTTATGATATAATTAAGTATATCTACTTATAACGATTATTGACTATTGTATTTTTGAGTTTGCAAAAAAAG
ATTTTTTATAGAATACTTTTTTTTTAGAATACTTTAGTATTCTAAAAAAAAAGTATTCTAAAAAAAAAGAATCGAATGGATTATATAAATAATAAGAAAA
TAGCAAAAAAGGAGAAGCAATTAAAAAGATTTGATTTTTCTTTTCCGATCTCGCGGCCTTTCTATCCTTCTAATCGAACTTGAAATTGGATTCAAAGTAC
GACTTAGTCGAATGCGCCTATTTCGAATCCAAAATCTTTTTCGTCTACTTCCTTCCACATGCAATACTTATTCAACCACTCTCGGACCCCACAAATCCGC
TGTAAGGATTGATACATAGGACTTTTAGTTGATTGATATTGCCGTAAAGTTGAAACTTTTTTAGGCTTTTTTATTAAACTGTAATTTCCTCTCTGCATAC
GTGCTCTTCTAGAAGCATATACAATAATGCGCGGTAAAGGAGGGAAAATAGCATACTCAATCAAGGGACAAATTCTTTTACCTACTACAGATCTCATACT
ACCCCTTAGACTTTGTAAGGCCATATACCACCCCCAAAGGGTATGAAAATACCGGATGACCTTAGCTTTTCGACGAATCCTCGTCTCGTGCAGCGAAGTC
CTGTTAGTAAGACCCCGCGCAAAAATGGATTATATAAGAATATAATTCCGAATATTCTCCGGGTGCGTATAGTAGCATTGCGATTCCGAATCTTTTTTCT
TTGTGAATAGAAAAAATTCATTGTATCGTTGGGTCGGAGGTTTGCTCCAGAAAAATTCGGAACAAAACGTCTACCGCGTTGAAGCCCATAGCCCCATGGA
GTTCCGCGAAAGTATGATTCTTATCATCAGGAGCCTTTTGAACGTCTCTACGATGGGTCCAGATTCTATAGCAGTCCAATCTGAAATGAAAGACTTCTCG
CTCTTGATCGGAGTCGTAAACTAAAACTACCTCTTCATCAAGGTTATAGAAAACTTCGTCATCTAGTTCTACCATTTTGAAAATCAATTCTCTTTTCTTA
CGAGCATTTCGAGTCACTTGTTGACTCACGATTGTGCCTGTTAAAAGTTTCAAAATGTCCTCTTTTTTGAAAGAGAGTCTTAGAAAGGGGTCTAACTTCC
AAACTCTGTCTTTTTTCATTCATTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGGAATAGAATAACCCGGTTAAAGGGTAATGATCATACGTCTGTAAT
GCATTGTATGTCATTGATTCTTTCCCAATAAATGAAAACTTTTTCTGTAAATACTGCGTATTTGATTCCATTATCATATGATAATACTCTATTTGTATTT
ATTTATTGTATTATACCTTTATATCTTCTAAATATATAGAATAGAGGAATCCCGATTTGTCAAGTCTCATGATCGTATCAAAATCTATTTAAACTCGGCT
CAATCTTTTTTCAGATTGAGACGAGTTTAATTGCAATCAATTAGAAGAAAAAAGAAGAATTACTGCATTTTCGTAACTGATTTTTGATCTTTCTATTTCT
CTTCTTTTTTATTTAGACCTTTTTTCTATCTAATTTTATCCACTTAGTCTAGCTATCTAGTTTATCTACCGGCTCGAACTCGAATTTGATCGCTTTCCAT
ATTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCTGATCGGATAATTTCATTACCTTCACGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTA
CACAGGCTTCTAAAGCCACCCGATTAGCTGCTGCACCAGGTGCATTACCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGCAATACAGAATCATCTCC
AAAGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCCCCTGAAGCCACCGGTATAACACCTGGCATGGATACCCAGTCCTGAGTGAAAAAGATA
CCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCATTTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCAG
CGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTAATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCTCG
GTGAATGTGAAGAAGTAGGCCGTTGTCGCGGCAATAATGAGCCAAACTAGTATTTGCGGTGAACCCCCCGGTTAAGTAGTCATGCATTACAATAGGAACC
CCTAATTCCCTCGCAAATACAGCTCTTTTAATCATTTCTTCGCATGTACCTGCAGTCGCATTCAAGTAATGCCCCTTAATTTCACCGGTTTCGGCCTGTG
ATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCCCTCCAACGCATAAATGGTTGTGAGTTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACC
GCGTAGACACTCATAACATGCTCTACCATAATTTTTTGCAGATAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCGTATTTGTTCAAC
TTATCCCTTTCAACTTGGATACCATGAGGCGGACCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGCAGATCCTCCAGACGTAGAGCGCGTAGGGCTT
TGAAACCAAATACGTTACCCACAATGGAAGTAAACATGTTAGTAACAGAACCCTCTTCAAATAGGTCTAATGGATAAGCTACATAAGCGATATATTGATT
ATCCTCCCCAACAACGGGCTCGATGTGATAGCATCGGCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAA
GATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCGGAACCCCCGGCTGAGGAGTTACTCGGAATGCTGCCAAGATATCAGTGTCCTTGGTTTCGTACT
CCGGGGTGTAGTAAGTCAATTTATAATCCTTAACACCAGCTTTAAATCCAACACTTGCTTTAGTTTCTGTTTGTGGTGACATACGTCCCTCCCTACAACT
CATGAATTAAGAATTCTCACAACGACAGGGTCTACTCGATATGGATTAGGCGTAAATGAAACCTTTGCAAAAATCTTAAAAAAAAGATATTCAATTAATA
TCAACTCATTAAAGAAAATGGGGGGCATGCTTAAGTTAATGAATATGTTTCATTCATATAATATGTTTCATTCATATATAATGGGTACACCCTGTGTACA
TTCTATGCTATAGGAATTC