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Detailed information on CNT30690829


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595740Oryza sativaOryza meridionalis10.9923.3510060forward
CNT30115468Oryza sativaOryza nivara46.897.42100256forward

Expression of CNT30690829

Peptides detected in this lncRNA

>peptide 1 (42 aa)
SRIHSMFLKQVLQTIVLTSHSPPKVPELFLVHMQPELCCSLI*

Sequence

>CNT30690829
TCCCGAATCCATTCCATGTTTCTTAAACAAGTCCTTCAAACCATCGTGCTAACAAGCCATTCTCCTCCGAAAGTCCCAGAGCTTTTTCTGGTCCATATGC
AGCCTGAACTGTGCTGCTCTCTGATTTGATTCACTTCCTTTCCATCTCCTCTCCTCGCTTTAGTAGGTTAGGCGAGCGGCTTAATACTTCTCTGCTCAGA
GTCAAAGAGGCAAAGTGCTAACTAAACTACTAAGGAAAGAAATTCCATTCCCTAGGGCAGATCTTCCTCTCTCTCCCCATGGCCTTTCGCCTCTGAAAGC
GTCCTTCCTTCTCAATGCCCGGGCATAAAATGTATTTACAAATGAATGTCTGGAATGACTAACCAATACATGTCGTGGAAGTGAATGAGTTGCATCATAG
GTAAGTCAAAGCGCAGTCTGTTAAAACAGCATCTAGTTCCATCTTATTTTCGTTAGTTCCTTTTTTAGTCACAACCCATTCTGCTTCCGTTTGACTCGAC
TTCTCATCTTTGTTCAAATCCTTTCTGCAAAGCCTTGATCCCGGCT