Detailed information on CNT30690730


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30383152Oryza sativaTriticum turgidum24.3613.689.4185forward
CNT30552445Oryza sativaOryza glaberrima10081.9298.57349forward
CNT30255378Oryza sativaAvena sativa23.7819.5390.3683forward
CNT30678966Oryza sativaTriticum urartu24.3616.5789.4185forward
CNT30719808Oryza sativaTriticum spelta24.3619.9589.4185forward
CNT30369401Oryza sativaOryza glumipatula10079.1498.57349forward
CNT30148777Oryza sativaBrachypodium distachyon25.219.8890.9188forward
CNT30574751Oryza sativaOryza barthii10091.3698.57349forward
CNT30115808Oryza sativaOryza nivara10082.798.57349forward

Expression of CNT30690730

Peptides detected in this lncRNA

>peptide 1 (32 aa)
KTKKMYINKILRLSKEFYLGARRQHDIHETLR*

Sequence

>CNT30690730
TAAGACAAAGAAAATGTATATAAATAAGATTTTGCGATTAAGTAAGGAATTTTATTTAGGGGCCAGGCGGCAACATGACATACATGAGACGCTAAGGTAG
CTAGGTAGCTAGTACATGGCATATGTAGTGGTACTGGTAGCTCGTTGATCAGGTGATGAATTGGATGGAGATAAGTTTCTTCTAGTTGCAGTTGCAGCAG
GAGCAGCCGCAGCTGGTGCCGCACTTGCAGCTGGAGCCGCATCCGCAGTTGCCACCGCAGCACGACATGGTGATGATGATGAGAGCTTCTTCTTCCTTCT
CTGGCCTTGTCGGCAACTAGCTGCTGCTTACTTGTATGGAGCTTCTCAG