Detailed information on CNT30690670


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006839, E-value = 4e-142

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067785Oryza sativaLeersia perrieri42.3313.9582.46171forward
CNT30574795Oryza sativaOryza barthii96.0477.2998.45388forward

Expression of CNT30690670

Peptides detected in this lncRNA

>peptide 1 (74 aa)
RACHFHISQTISDNLIRRFRRVTSHIPRRIVTTLSSKERIPVMSYASCVVIALPRAARAMSDLLQLGSCSVGLP*

Sequence

>CNT30690670
AGAGCTTGTCATTTTCATATCTCCCAAACCATAAGTGATAATCTGATTCGGAGATTCCGGAGAGTAACGAGCCATATCCCGAGGAGGATAGTGACTACCC
TCAGCAGCAAGGAGAGGATTCCGGTTATGAGTTATGCTTCTTGTGTGGTCATTGCTCTGCCGAGGGCGGCGAGGGCAATGAGTGATCTCTTGCAGCTTGG
CTCTTGCTCGGTTGGTTTGCCCTAGTGGAGTTGTGGCACCACCGGTTTTATCTTTTGCTTATGAACTCTATTTGAGACTTCCGCTGCTATATTTATGTGT
TGTATGTTGAGACCTCGGACCCTATTATGTGTCATATACCTCGCTGCACTTTAACCCTATTATGGTACTTGCTATGTTTATTAATTGCTTGCGATGAAAG
TGTG