CANTATAdb - search

Detailed information on CNT30690632

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3099789	Oryza sativa	Oryza rufipogon	59.98	83.5	99.19	496	forward

Expression of CNT30690632

Peptides detected in this lncRNA

>peptide 1 (31 aa)
GAWIERLTAISTSRYHSVCRWYRPKEIEVEG*

>peptide 2 (42 aa)
MRLKRSEPVNLFVRIRRPVTAAACETASGSACGSLDAATSVK*

>peptide 3 (38 aa)
MASERTYIFSRSYASELNGPIFLGTYRYQYWAVPITGL*

Sequence

>CNT30690632
GAGGGGCATGGATCGAACGGCTAACAGCAATCAGTACCTCCAGGTACCATTCAGTTTGTAGGTGGTACCGGCCAAAGGAGATAGAGGTGGAAGGGTAAAA
CTGTATTTTTGCGTTGGATATGAGGTTGAAACGATCGGAGCCGGTGAACCTCTTTGTTCGGATTAGGCGGCCGGTGACGGCGGCGGCATGTGAGACGGCC
AGCGGCAGTGCGTGTGGATCCCTAGATGCGGCAACTAGCGTGAAGTAGAGCACACATGGAAGGGCGTGGAGCTGAACGAGGAAGCTAGCTACCAAGCGAG
CTGTTCAGTGGCTGGAGGAAACCCTCGACGGCAACACACAGTGGTGGTACCAAGGCCGGAGTGGTTGTGTTGCCGGTCCGGTGGGTGACTCCGACTAATA
TGCTTCTGCCGCCGGCGGCAGTGCCAGAGGAGGAGGAGGCAACAACGGGGGAGTAGGCGCCGGCGGAGGAGGAAGGGGACGCGGCGGTGGCAGTGAAGGA
GGAGGACGTGGCGGCTGAGGAGTTGCCGCTGGAGGGCATGGAAGGGGAAAGGATTACGGCACACACGCGTGTGGGCTGCGACTAGATGGCAAGCGAGCGC
ACCTACATTTTCTCCCGATCGTACGCTTCCGAATTGAACGGTCCGATCTTTTTAGGTACCTACAGATATCAGTACTGGGCGGTACCTATTACTGGACTAT
AAAAATTCTCTAACAAATATATGATTTTATTAAAGTACTTTGACTAAGCTATACATGTAGTCACCATATTTGAAAGACAAATATTTTAAAAATGATTCAT
AATTAAAGATTCTAAAGTTTGACCTCA