Detailed information on CNT3069057


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40910|PAL4_POPKI, E-value = 9e-61

BLAST vs NONCODE:
NONVVIT002503, E-value = 7e-33

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30162465Quercus suberPistacia vera18.6520.738580forward
CNT30358787Quercus suberLactuca sativa65.7375.8178.37282forward

Expression of CNT3069057

Peptides detected in this lncRNA

>peptide 1 (40 aa)
ASKRTIEAKPEPTAVPFTRARPSFGCNSKNPELIPASWKA*

>peptide 2 (29 aa)
MLWLRNFVMASMTSNLMPEYPWRRGVDPH*

Sequence

>CNT3069057
GCCTCGAAAAGAACCATAGAAGCCAAGCCAGAACCAACAGCTGTGCCATTCACAAGAGCAAGGCCTTCTTTTGGCTGTAACTCAAAGAACCCGGAATTGA
TACCAGCTAGTTGGAAGGCTTGAGCAGCATCAAGGGATTCACCAGATGGTCCAACGGCTTTAGAATTGGGGCGGCCAGTTAGCAGTCCAGCAATGTAGGA
TAGAGGGACAAGATCACCAGAAGCAGTGATTGTACCGCGAAGAGGCAAGACAGGAGTGATGTTATGGTTGAGGAACTTCGTGATGGCCTCCATGACTTCA
AATCTAATGCCAGAGTATCCTTGGAGAAGGGGTGTTGATCCTCACTAGCATTGCAGCTCTTGTTGCTGAGTGAGACAATGTGTGGCATGTCTCTGTTCCA
TTGCCAAATATTCCAGCGTTCAAAAATCT