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Detailed information on CNT3069055


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 1e-30

BLAST vs NONCODE:
NONGMAT000508, E-value = 2e-75

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30496126Quercus suberDigitaria exilis27.812.7986.2187forward

Expression of CNT3069055

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSPLIRLTPPRLAKRRMAGFVIPWMLSLRTLRCRFAPPFPKPLPPFPLPDIFSLSLSLAPCF*

Sequence

>CNT3069055
GTAACAGTCTTGCGGCGAGCGTGCTCGTGTAGGTCACAGCATCGCGGATCACGTTCTCCAAGAAGATCTTGAGGACGCCACGTGTCTCTTCGTAGATGAG
CCCGCTGATACGCTTGACTCCGCCACGCCTCGCCAAACGCCGAATGGCAGGCTTCGTAATTCCCTGGATGTTATCCCTCAGAACCTTACGGTGCCGTTTC
GCACCGCCCTTTCCCAAACCCTTGCCTCCTTTTCCTCTTCCTGACATTTTCTCTCTCTCTCTTTCTCTGGCACCTTGTTTTTGAAAGACTGTTTTGTTTT
TGTTTTTGATGGG