Detailed information on CNT30690545


BLAST search results

BLAST vs Swiss-Prot:
sp|A0A517FNC4|72A61_PARPY, E-value = 9e-114

BLAST vs NONCODE:
NONORUT000400, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595436Oryza sativaOryza meridionalis40.5788.5291.08370forward
CNT30115825Oryza sativaOryza nivara33.2210097.03303forward

Expression of CNT30690545

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MMAQAQTPSVEESGTMPSWTQAARSFGRCRFVAPNRMGGMLPDP*

>peptide 2 (65 aa)
MVDEQHGDFNANTSWVSDSSYLHLFVCFPTNLDERWVQPKNLVEDHYTDNFEAAQAFVVRFVLPK*

>peptide 3 (57 aa)
MQIRGPQPNGRNAPGSLDALEIPSENLSGLNSCTSLPHESGSWWMNNTGILMLTPAG*

>peptide 4 (42 aa)
MCFVFDSSNMPSKSSFVLSPSFIACILFPIKPLRIDSISLFI*

>peptide 5 (31 aa)
VGIPYPNFITKVQISQLTTKSCNNKTRYNLK*

Sequence

>CNT30690545
TGTAGGTATCCCTTATCCCAATTTTATTACAAAGGTACAAATATCACAACTCACAACCAAGAGTTGTAATAATAAAACACGCTATAATCTGAAATGATCA
TATAGCTCTAACTTTCATCTGTGCACCGTGCATTGGATGCAGAGTTACCATAGTATGCGGCGCATGAGTATATGATGGCGCAAGCTCAAACTCCAAGCGT
TGAAGAATCAGGCACAATGCCATCTTGGACTCAAGCAGCGCGAAGTTTTGGCCGATGCAGATTCGTGGCCCCCAACCGAATGGGAGGAATGCTCCCGGAT
CCTTAGACGCCTTAGAGATCCCCTCAGAGAACCTCTCAGGCTTGAACTCATGCACATCACTTCCCCATGAGTCCGGATCATGGTGGATGAACAACACGGG
GATTTTAATGCTAACACCAGCTGGGTAAGTGACTCCTCCTATCTCCATCTCTTTGTATGTTTTCCAACCAATCTCGATGAACGGTGGGTGCAACCGAAGA
ACCTCGTAGAAGATCATTATACTGACAATTTTGAGGCGGCTCAAGCCTTCGTAGTCAGGTTTGTTCTTCCTAAATAATCCCATAATCTCTTCCCTTGCAT
GGTCCTGCCACTCCGGGTGTATGCTTAATAGCAGCATGGTCCATGTGAGAAGCACTGATGTTGTCTCCGCTCCTGCAAAGTAGAACAGCTTGCACTCCTC
CACGATATCCTTGATTGTCAACCCCTGGCTTGATTGACCATTCTCTTCCATGTGCTTTGTGTTTGACTCAAGCAATATGCCAAGTAAATCATCTTTTGTG
CTTTCACCTTCTTTCATAGCTTGCATTCTTTTCCCAATTAAACCTCTTAGAATCGATTCGATCTCTTTATTTATTTGATGCATCTTCCGGTTGTTCTCAA
TAGGCAAAGACC