Detailed information on CNT30690490


BLAST search results

BLAST vs Swiss-Prot:
sp|Q5N8Z0|DRB1_ORYSJ, E-value = 6e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30148805Oryza sativaBrachypodium distachyon44.7813.8286.67120forward
CNT3099896Oryza sativaOryza rufipogon10028.91100268forward

Expression of CNT30690490

Peptides detected in this lncRNA

>peptide 1 (32 aa)
DCHPNIVTERKNGRALRQYQVRTAWIDLDSVS*

Sequence

>CNT30690490
CTGACTGCCACCCAAACATCGTCACTGAAAGGAAGAACGGTCGCGCCCTCCGGCAATACCAGGTCAGGACGGCGTGGATAGACCTGGACTCGGTTAGTTA
ACAAGGAGCAGCCGCATCCAGTAGAACTGACAGTACTGGCTGAGGCTAAGGGGTCAGAGCCGCATCCACTAGAACTGACAGTACTGGTTGAGGCTACAGG
GGCTGAGTAGGCATCTTCCAACGGTGTGAGCTCCGGAGACGAGTCCATTACTTCAAGCACGGTCTTTG