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Detailed information on CNT30690467


BLAST search results

BLAST vs Swiss-Prot:
sp|O24174|BADH1_ORYSJ, E-value = 2e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099590Oryza sativaOryza rufipogon75.2510099.73371forward
CNT30574999Oryza sativaOryza barthii75.4610097.58372forward

Expression of CNT30690467

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MLAMLRFLVTMPAASPYLVQLAFSIASSTVLKKKKSSDHKSSF

>peptide 2 (50 aa)
LIFFGPSAGCCAILIPRHTNCRDVDPNSTCGDRRHSLLLATLRLQLPRLG*

Sequence

>CNT30690467
CTAATTTTTTTTGGCCCTAGTGCTGGCTGCTGTGCAATCCTAATTCCACGCCACACTAACTGCCGAGATGTCGATCCCAATTCCACGTGTGGCGACCGGC
GACACAGCTTGTTGCTTGCGACTCTGAGGCTGCAGCTACCTCGCCTCGGTTAGCTCTTGGCTCCTGCTTTCCCCCTCCTCGTCCGCTCGTCATCCTCGAC
TTGACCCTCGACAGTTCATCCTCAGACTGGTACTTGTCCATGGCGACCATCCCTTGGTCCCGGCCGAACCCGCTCATCTTGTACCCGCCGAACGGCGCGT
CGGGGTCGAAGGCGAAGTAGCAGTTCACCCACACCGTGCCGGCCCGCACTGACCTCGACACCATGTTGGCAATGTTGAGGTTCTTGGTCACAATGCCGGC
AGCCAGCCCGTACTTGGTGCAGTTGGCCTTCTCTATCGCCTCCTCCACCGTCCTGAAGAAAAAAAAAAGTTCAGATCATAAGTCAAGTTTTCA