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Detailed information on CNT30690363


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000057, E-value = 8e-117

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30105868Oryza sativaOryza longistaminata80.5857.7996.43560forward

Expression of CNT30690363

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MEKSGPCFLFHHLQMYHSPLLQLDPLLTCLKYCESQLHNLSEAPPYK*

>peptide 2 (29 aa)
MGSQGKVRPHLMLNGCLTSCGNLHLHNQS*

Sequence

>CNT30690363
TGATGACCTGGCTTCTTTCGAAGTTTAAAACTGTCACCTTTTCTCTCCATCAATTCTTTGGCAGCTTTTAACCGAGCTTCAGCAAACTCCATTGCTTCTT
TGATAGCAGCAGCAGCAGCAGCTGAGTTAGTACTGACTTCAGAATCTCCATTTGCTTTACTTTCCTTTTTATTAAGCAATTTGGATGGTGGCTGTACTTT
GATGGGTTGTGTGTGAAGGCTGTTATTTGGGACCCTTAAGAATGGGTAGTCAGGGGAAGGTACGTCCTCACTTGATGCTGAATGGGTGCTTAACCTCTTG
TGGTAATCTTCATCTTCACAATCAGTCTTAGAAATGGGATGACATGTTGGTGTGTGCAGGTTCTGATCAGCCACAGAATCACTACTAGCACTCTTCAGGC
TTGAACTTGATGGAAAAGTCAGGCCCATGCTTCCTTTTTCACCATTTGCAAATGTATCACAGTCCACTACTACAACTTGATCCATTGCTGACTTGTTTGA
AATATTGCGAGAGTCAACTACATAACTTATCGGAGGCTCCACCATACAAGTAGTCATTTTAACTATATCATCTGGTCTTCCCCTGGTAGCCTTGTTATAT
GACATACTAAACTGTTTCCCACTATCCGGAGGAGAGGAGATTGGAGAAAATTCGTCTTCATCAAAGTGTTGGTCATAACCTACAGTTGAATAGTG