Detailed information on CNT30690283


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099968Oryza sativaOryza rufipogon45.8830.07100178forward
CNT30116543Oryza sativaOryza nivara42.2771.386.59164forward

Expression of CNT30690283

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MKRMERERERERERGAAAGSPSPQRGRICRRGGSESMATAVARVPGGG*

>peptide 2 (34 aa)
DGGGGDCYQVHYMYSLFVTMSPKPPNRRRPPIRK*

Sequence

>CNT30690283
CGATGGCGGCGGCGGCGACTGTTACCAAGTGCATTACATGTATTCCCTTTTTGTTACCATGAGCCCTAAGCCGCCTAATCGCCGGCGTCCACCGATCCGG
AAATGAAGAGGATGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGGGGCGGCTGCCGGCTCCCCCTCGCCTCAGAGGGGCCGGATCTGCCGGCGAGGAGG
GAGCGAGAGTATGGCGACGGCAGTGGCCCGCGTGCCGGGCGGCGGCTAGCACGGCAGCAGAGAGTGCGAGGAGGAGGTCGTCACCTGCAGGAAGAAGAGA
ATGAGGGGGGCGGCCATTGCTTGGGCAGGAGAGAGAGCGGAGCGAGAGGAGGAGAGGAGGAAGACGAATGGTGGCGGCTAGGGTTTGG