Detailed information on CNT30690240


BLAST search results

BLAST vs Swiss-Prot:
sp|Q42690|ALFC_CHLRE, E-value = 7e-07

BLAST vs NONCODE:
NONORUT000701, E-value = 2e-118

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30729011Oryza sativaCorchorus capsularis31.415.3586.41103forward
CNT3074945Oryza sativaBrassica juncea31.411.184.47103forward

Expression of CNT30690240

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKAFCAFTTFSVLPPQALRRQWQARQQGQS

Sequence

>CNT30690240
CAGATTATTGCGACAAAAGTTTTTGATACCCGTAAGATTGGACGCTTGATAGCCAAACCACACTCAGAACCCTAAATATGCATACGGAGGATGTCCAATC
GGATCTTCAGCCACCACCAGAAGCAGATCAGTACTTGTAGTCCTTGACGTGAAGGCTCTCAGAGGCACCCTCGCCGAGCACAGCATCACCCTGGTATGTA
CCAAGGGTAGCCTCAGAGTTGGCCTTGCACCTGGTGATGAAGGCCTTCTGCGCCTTCACCACGTTCTCCGTCTTGCCGCCCCAGGCCTTGAGAAGACAAT
GGCAGGCACGGCAGCAGGGACAGTCCTC