Detailed information on CNT30690207


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522907Oryza sativaSetaria italica44.4824.9690.78141forward
CNT30536141Oryza sativaEucalyptus grandis62.4654.5581.31198forward
CNT3044269Oryza sativaPrunus dulcis49.2126.1382.05156forward
CNT30181670Oryza sativaSecale cereale37.5441.6190.76119forward
CNT3082886Oryza sativaBrassica juncea27.1333.4686.0586forward
CNT30230907Oryza sativaAnanas comosus51.4254.8889.57163forward
CNT30714885Oryza sativaMalus domestica golden55.8436.3488.14177forward
CNT30720826Oryza sativaTriticum spelta62.1533.0588.32197forward
CNT30597158Oryza sativaOryza meridionalis76.6635.4295.47243forward
CNT30371509Oryza sativaOryza glumipatula75.3941.2894.98239forward
CNT30105031Oryza sativaOryza longistaminata69.428.5394.09220forward
CNT30318742Oryza sativaAsparagus officinalis32.1816.4590.2102forward
CNT30149302Oryza sativaBrachypodium distachyon74.7639.6391.14237forward
CNT30115704Oryza sativaOryza nivara63.4159.4798.01201forward

Expression of CNT30690207

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MALRSLSSLSLVTTTLEGWMPTLTVEPFTFSLVIRSTWMTQRRRYTCTTFPSRPL*

Sequence

>CNT30690207
GAAGCAGTTGATAGCGAAACAAAAGCTAGATAAGGAGGGGGGGAACAGTAGGAGCACCAGCAGATCCGACCCACGAGCCTAATCGATCTCCTGGAGCGAG
GATGGCCTTGCGGTCCTTGTCGAGCTTGAGCTTGGTGACGACGACCTTGGAGGGGTGGATGCCGACGTTGACGGTGGAGCCGTTCACCTTCTCCCTGGTG
ATCCGCTCGACGTGGATGACCCAGCGACGGCGGTACACCTGCACCACCTTCCCCTCGCGCCCCTTGTAGCTCCCCCTCACCACCTGCACCTCGTCGTCCT
TGCGGATCGGGATGGAC