Detailed information on CNT30690198


BLAST search results

BLAST vs Swiss-Prot:
sp|Q94C25|Y5005_ARATH, E-value = 4e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674806Oryza sativaSetaria viridis4.3822.6786.3295forward
CNT3069516Oryza sativaQuercus suber6.0441.5983.21131forward
CNT30222581Oryza sativaHordeum vulgare9.2783.7587.06201forward
CNT30552096Oryza sativaOryza glaberrima5.5420.6283.33120forward
CNT30661857Oryza sativaTriticum dicoccoides5.2136.8183.19113forward
CNT30680010Oryza sativaTriticum urartu16.797.8480.11362forward
CNT30109319Oryza sativaOryza longistaminata6.1336.6499.25133forward
CNT30319637Oryza sativaAsparagus officinalis11.9934.1279.23260forward
CNT30149310Oryza sativaBrachypodium distachyon11.0266.7682.85239forward
CNT30580303Oryza sativaEchinochloa crusgalli16.7977.7887.36364forward
CNT30115738Oryza sativaOryza nivara19.6561.3881.22426forward

Expression of CNT30690198

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MMNLSNCCYFIDELFSISCRVFYHFNCHRHSVW*

>peptide 2 (33 aa)
MNSSPFPVECSIILTATGTPFGSRPLYTLPNPP*

>peptide 3 (33 aa)
MMNEKTTNAATDDVAELTEKGKLAHCIRIESCG*

>peptide 4 (31 aa)
MDNYILKIKTEQSNKMYQRTWPWWGRIEFWL*

>peptide 5 (46 aa)
DKNNTLCFDILYLCCMGKIAIIQFPCRIFLQATRYGPMKRTRTASY*

>peptide 6 (42 aa)
MIYGTTWLSYETNGLGGTSIFCNLPVSMFTTFVIVGRFLGFH*

>peptide 7 (42 aa)
MHHDHMNIFAIVKFSLHLILQYHHKTVLCANSRIFVMPDKDD*

>peptide 8 (39 aa)
MCFLLLLIHGNKERRFILHTVNQHYYAARQLSITPITLL*

Sequence

>CNT30690198
GACAAAAATAATACTCTTTGCTTCGATATTTTATATTTGTGCTGCATGGGAAAAATTGCCATAATTCAATTTCCTTGCAGGATTTTCTTGCAAGCCACTA
GATATGGACCCATGAAACGGACGAGGACGGCATCTTACTGAAATAGTACAGCGAGGAGTACTCTGCACACCGTGGTTGGATGGAGATATACATCGCAACA
ACTGAACAAGGTAATCACATCAACTGATGTGTTTCTTATTACTTTTAATACATGGTAATAAAGAGCGACGATTCATACTTCATACAGTTAATCAGCATTA
CTATGCAGCACGTCAACTAAGTATAACTCCCATAACATTACTATGATTTATGGCACAACATGGCTTTCATATGAAACAAATGGCTTAGGGGGCACCTCTA
TATTCTGCAACCTTCCAGTTAGCATGTTTACAACCTTCGTCATTGTGGGACGGTTTCTTGGGTTCCACTGAATGCACCACAGTGCCACGAGGGCCATCTG
TCTAACCTTCAGTCTACTTCTTCTGTCATTTCCCTACTAAGTACAAAGTCCTGCTCAGTAATTACTTTCTCATAGATCCACTCTGGAAAGTAGACCTCAT
TTTGGTTCTCAATACTCGGGTCTGAGTTTCTCCTTCCACTCACCATTTCTAACACAAGCATGCCAAAACTATATACATCTGACTTGTAAGATATCTCCCC
AAAGTTCCTAGAATATAGCTCTGGTGCAATGTAGCCCATCGTGCCTCTTGCTTTGGTCAAGGTAACAATGCTTTGGTCCCTTGCACACAGCTTTGCAAGA
CCAAAGTCTGAAATCTTCGGATTGAAGTTATAGTCAAGCAATATATTATTAGGCTTGATATCAAAATGGAGGATGCGTTGGTTGCATCCTTGATGAAGAT
ACTCCATTCCTCGGGCAATGCCTAAGGCAACATCTAACATCTTTTTTGGTGCTAGGAGTTCTTGAGAAGTATTAGGGTCATGCAAGAATATGCATTTCTC
CAATGATTCATTAGGCATGAATTCATAGATAAGAATGTGCCGTGTTCCTTCAGAGCAGAATCCCAGAAGGCGGGCAATGTTTATATGATGAATTTGTCCA
ATTGTTGCTACTTCATTGATGAACTCTTCTCCATTTCCTGTAGAGTGTTCTATCATTTTAACTGCCACAGGCACTCCGTTTGGTAGTCGTCCTTTGTATA
CACTTCCAAATCCACCCTGACCTAATTGTTCCTTGAAGCGTCTCGTTATCTTCTTAACATCAGAGAAACTGTACCTTGTGGGCTTCGATGTGCCATATGT
CCTGAGGAACATTTCAACCTTCAAATGTACCTCTTCATCATACCTTGACTTCAGTGAAAGATAGAGTGCTGTGGCCATGATGAACGAAAAAACAACAAAT
GCGGCTACCGATGATGTAGCTGAATTAACAGAGAAGGGGAAATTAGCACATTGCATTAGGATCGAAAGTTGTGGCTAGTAATCAACTGATTGTGATTGCC
TGATGGGTACTGTAAGAGCAGGTGGTGTCTTTTTTAGCAGAAGAATGCTGAGTCAGAAGACTCAGAACTGCTAGCAATAAGAATTTATATGTACTGATAA
CATTGTTTCTTTTCTCTTTTTAATAGAAAGGTAGGTTTGAGTACTGCAGTACCTGAAATGACTTTCACACGCTAACCTGCAAGTATGAACGAAGATAATA
AGTTCTGGTTGGTGGTTTTAACAGATAATGGATAATTACATCTTGAAAATAAAAACAGAGCAATCCAACAAAATGTATCAGCGAACATGGCCCTGGTGGG
GTAGGATAGAGTTTTGGCTCTAAATTTTTATGCACCATGATCATATGAATATATTTGCAATAGTGAAATTTTCCTTACATCTTATTTTGCAGTATCATCA
TAAGACAGTTCTGTGTGCTAACTCTCGTATTTTTGTCATGCCAGATAAGGATGATTAGGATGAGTTGAGGTGGGTTATGGGCTAAATTATAAAGGCTTCC
ACATATCACCTCCCATGTCTACTAATCTATTATCAAAGCAACCAAAGATCTAACTGCAGCTCCTGTTATATCAGGTAACAAACCAAAACTTAGATTATAT
CGTGTATACCTCTGTAATTATTCCTTTATCTTAATGAATTTTGGTCGGCTTCCTTTCGCCGACCTGGC