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Detailed information on CNT30690186


BLAST search results

BLAST vs Swiss-Prot:
sp|Q94CS9|TIP12_ORYSJ, E-value = 1e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552153Oryza sativaOryza glaberrima78.126499.75400forward
CNT30660459Oryza sativaTriticum dicoccoides22.8518.0893.16117forward
CNT30369415Oryza sativaOryza glumipatula78.1243.299.75400forward

Expression of CNT30690186

Peptides detected in this lncRNA

>peptide 1 (35 aa)
GCVDIILQMRQPMDGRRYSCNAWLAWLTAQHRFWN*

>peptide 2 (33 aa)
MTISNTTAFQAPTPADSEKAPTAAPPVAILSSRH

Sequence

>CNT30690186
GGGATGTGTTGACATTATATTGCAGATGAGACAACCGATGGATGGACGACGTTACAGCTGCAATGCATGGTTGGCTTGGTTGACAGCACAGCACAGATTT
TGGAATTAAAGGAGATTTACGTAATTTGTTTGTACAGAAGAAGAGAGTAGTAATTGATTGGGGGTGGAAGACGACACAGGTAGCAGCTGCATGGAGTAAT
TAATATTCTAGCTATATATGGATCGAGACGGGGGACGAATTCGATTATTGAGACTGGGAGCAGACGATATGATATGATATGATCAGTAGTCGGCGGTGGG
CAGCTGGTCGTGCGGGCGCTGGCCGATGAAGATGATGTCGTAGATGAGCGCGGCGATGGCGGCGCCGACGAAGGGGCCGAGCCAGTAGACCCAGTGGTTG
CCGAAGGTCATGACGATCTCGAACACCACCGCGTTCCAGGCGCCCACGCCCGCCGACAGCGAGAAGGCACCCACGGCGGCGCCGCCCGTCGCGATCTTGA
GCAGCAGGCACG