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Detailed information on CNT30690122


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30110762Oryza sativaOryza longistaminata69.3576.6991.44362forward

Expression of CNT30690122

Peptides detected in this lncRNA

>peptide 1 (76 aa)
KKEKKTGGSLLQALAATSPASYHRRRCSCLRRRRRRRRFSRRRPSPPHPLVSLRGLLLDAAASIRDEKAPDSTGSS*

>peptide 2 (57 aa)
KRKKNRGIAPASPSRHISCVLPPPPLFLSPPAPPPPPVQPSSSFATPSARLLAWLAA*

Sequence

>CNT30690122
AAAAAAGAAAAAAAAACAGGGGGATCGCTCCTGCAAGCCCTAGCCGCCACATCTCCTGCGTCCTACCACCGCCGCCGCTGTTCCTGTCTCCGCCGGCGCC
GCCGCCGCCGCCGGTTCAGCCGTCGTCGTCCTTCGCCACCCCATCCGCTCGTCTCCTTGCGTGGCTTGCTGCTTGACGCTGCTGCATCGATCAGAGACGA
GAAGGCTCCAGACAGCACAGGAAGCAGTTGAACAGGAGTAACAAGGGAAGGAAAAGGTATGAAGGGTTCCAACGTTGAAGGAGTTGAGTCGGAGTATCGA
AGGAGTTAAAGCAAGTACCTAATGACATTGATCGGCATGGGGCGGGAGTAGCACCCTTGGACTACACATTATTATTGCACACTATTGGAATTTAGTTTTA
GATTATGTTTCTGCTTAGCATAAGTTTTGCGTAGAACTTGTAACGGTCATTTAAAGTTCCGGTCCTTATTTTCACGTGGAATTTGAGGAGCTAGGATGGT
TTGGATTGTGTGGATTATATCG