Detailed information on CNT30690113


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099611Oryza sativaOryza rufipogon10069.65100280forward
CNT30574790Oryza sativaOryza barthii10062.78100280forward

Expression of CNT30690113

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MQAKFSKKSKRKKATQPIRAAKQSMEQAAIKMDRFRSAASSLITSTPQLVLKQTRHKQDYQNIHKFRP*

>peptide 2 (39 aa)
PRKHELIPTDASKIQQKIEKKKGNPTHKGSKAEHGTSCD*

Sequence

>CNT30690113
TTCCAAGAAAACATGAGCTGATTCCAACGGATGCAAGCAAAATTCAGCAAAAAATCGAAAAGAAAAAAGGCAACCCAACCCATAAGGGCAGCAAAGCAGA
GCATGGAACAAGCTGCGATTAAGATGGACAGGTTCAGAAGTGCGGCATCCAGCCTAATAACATCCACCCCCCAGCTGGTACTTAAACAAACACGACATAA
ACAAGACTACCAAAACATCCACAAGTTCAGGCCATAACATAGCAGCCAAGCGGCTGCTCAGCAGAAGAACATGGAGCTCC