Detailed information on CNT30690014


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000387, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30603519Oryza sativaOryza punctata5.4975.3288.51174forward

Expression of CNT30690014

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MNRNSSISISMSIWVGKGRGEKNHHLLKKFLVSLNE*

>peptide 2 (37 aa)
MHIGRTARDRRTGGECKRIMMLVTCLFHALSVSNKKL*

>peptide 3 (29 aa)
MMNLCLSFLLVLSSFRIMTFDTFCFLAIL*

>peptide 4 (32 aa)
MLKNGSFANHLNDDLLQKKNKSVGWIRKSCVG*

>peptide 5 (38 aa)
MDQEVMCWMSAFSSLAQKDQSKKDRQLVYKCTCTCASDQ

>peptide 6 (37 aa)
KERNLLSFVLVFFLKKRFFLLVRAINGNQSRINTQPH*

>peptide 7 (42 aa)
MSEVQGLSAFQLLQFSWDKPAPVKLLIGYFLFVWCTVYCTVI*

>peptide 8 (40 aa)
MCKLFLFFDLFLLTCFCLMGPNQTEYSECFHSSFQKRAEF*

>peptide 9 (72 aa)
KRKKFTLICFSFFLKKTLFPISTRNKWKSIKNKYSTSLNSPHVCNIRRYLSKVKTITSLCVIASTLFFFHGS*

>peptide 10 (52 aa)
MASSVYYPTKPQFSLDRFAAKVAVTTLHSQLETEPSIQEHLQLGDNDEFDFL*

>peptide 11 (85 aa)
MNERMIVIDWLLNTQFLHSCDGMLTLCKQLLFWLCCLTRFRAKALLKSQSPCQLSANDWCSCVLPLFGRLVVAGKKFFASDLFGC*

>peptide 12 (83 aa)
MAPATYNPPASAGQFFLSFKNLSRSPNNGERQVSKMHFFFSLFFSLSFFPFVYMLVASNCNSTLPSTKYATLTTEFISPDKGK*

Sequence

>CNT30690014
AAAAGAAAGAAATTTACTCTCATTTGTTTTAGTTTTTTTCTTAAAAAAACGCTTTTTCCTATTAGTACGCGCAATAAATGGAAATCAATCAAGAATAAAT
ACTCAACCTCACTAAATTCTCCACATGTGTGTAATATTCGTCGGTATCTCTCTAAAGTGAAAACAATAACATCTTTATGCGTAATAGCATCTACCTTATT
TTTTTTTCATGGTAGTTAGTGACTAGCAAATTGAAAATCACACAGGATATGAAGAAGTTAAAAAAAAAAAGTTCAAATACCCCCTAAGCTTGAAAACCCA
AATTAACCCAAAGGAAAACAAAACGAGTGAAAAAGAATAAAATAGGAAATTACTGCCCATTTCCACCGCTGACTGTCCTACTACCCTGAAGCCTCTTCCG
ATCACCTCCGCCGGATTTGAGCACGCCGGCCGGCGAGGCCCGCCTCATCACCGCCAGGGCGGCGGCGCTCCCCTCTCTGCCTTCTCGCCGTCGAGGTATT
GAGAACTATGGCCCCTGCAACCTACAATCCTCCGGCATCAGCAGGTCAGTTTTTTTTATCATTCAAGAATCTCTCTCGCTCCCCTAACAATGGCGAACGT
CAAGTAAGCAAAATGCATTTCTTTTTCTCCCTCTTTTTCTCTCTTTCTTTTTTTCCATTTGTTTACATGCTGGTGGCCAGTAATTGCAATTCAACTCTGC
CCTCGACAAAATATGCAACACTGACAACCGAATTCATTTCACCGGACAAAGGAAAATAAATATCTCCATTCTGTAGCTCACATGCATGCTTGGCTTCAAA
AACAGTTTCAGTTCAAGAAAACCTGCTTCACACAATAAATCCCTTGGCTCCTTTCAAGATTGCTGCTAGTGTGTGTGTGTGGCAGGTTACCCTTTTGTCA
TCTTGAGCAGCAGATGTCAGAGAAGATTTCTGCTGTTTTTATTCAGTCAACGATTTGACTCATTAAAACAGACCAATGCATGTTAGGATGATCATAGCAA
AAGCTCTCTTCTTGTCCTAGTTCTTTTGGAAAAGGGAAATGACTTGTTGAGTCATTTCTGCCTTTGCTCACCATTTATATTCATGATGAATCTCTGCCTC
AGCTTCCTTCTTGTTTTGTCCTCCTTCAGAATCATGACATTTGACACTTTCTGCTTTCTAGCTATATTATGAATTGTCATTTCTTTCACACAAAAGAACA
AGGAAAAAAGAAGAAGAAGATATGGTATGCCTCCACTCAAAATGAAAAAGGCTAGAAATTAGGAAACAATGAGCTTGCGTCCTTCTTCCTGGATATAAAT
TGTTTCATATGACATGATTTGTCTGCTGAGTGCTGACCTGAACTTCGCGGCATTATCTAGTACTACAAGCTTTTGGACCTAACCACTTATCAGAAAATTC
CAGAGTCCATTTATGTCTTGATCAGTTCTACTTCAATAACTATATGGTATGTGCAAACTTTTTCTCTTTTTTGACCTTTTTCTGCTGACCTGTTTTTGTC
TCATGGGACCAAACCAAACTGAATATTCAGAATGTTTTCATTCTAGTTTTCAAAAAAGAGCTGAATTTTGACTGCGCCTACATTCGTTGATCGGCGATCG
CTGTCCCGACACCGTTTTATTTCTTGTCTTTCTCACTTGCACTGCACTTGAATTAATCCTCCACAGGGGCTGGCTGACAAACACAGATCCACTGGGACAT
CTGCTTCATCAAACTGGCACACACCCTCCCCTCAGCAAACAGCAACTCCTCCTGAATCCGTTTCAGTTCATGTCTGAAGTCCAAGGCCTCTCTGCATTTC
AGCTGCTACAGTTCTCCTGGGACAAGCCTGCTCCTGTTAAATTGCTAATAGGATACTTCCTGTTTGTATGGTGTACAGTGTACTGTACTGTTATTTAACT
GTGGTTAATTTAAACAGGTCATTCTGCTCTATATGATTGAGCCAAATGCACATAGGAAGAACAGCGCGAGATAGAAGAACCGGGGGCGAATGCAAAAGAA
TAATGATGTTAGTTACATGTCTTTTTCATGCCTTGTCAGTCAGTAATAAGAAACTTTAAATGCCATATTTCAGATTATCATGAAGGAAATCTATGAGCAA
ACAGCTAGCAGCTTTTATTATTGATAGACTTGGCCCTGGCTAGTCATTTGGAGCAGCAGGGTTTAGGAAATTATGGGTCTCTAAACCTCTGGAGATTGGC
CAATTGTCAGTGCCATCTAGCTCATATTGTACTGTACATCTCTTTCTTGAATCTGTACCGGTGACAGAACAATGGCATCATCAGTATATTATCCTACCAA
ACCACAGTTTTCCTTGGACAGATTTGCAGCTAAGGTTGCTGTCACCACCCTACATTCTCAGTTAGAAACGGAGCCAAGCATCCAAGAACACCTACAACTT
GGCGACAACGACGAATTCGATTTTCTGTGAAGCCTGATCAGTGGCTTGTCCTCATGTTCATCAAAAAATAAATAAATCCAAGCAAGCAATTATCATCAAG
GGTCTCCAGATTCAAAAACTGCGACTGCAAGATGGGGAGGAGCATGTCCTTGTCCTGATGCAGACTTTGCTTATATTCTGGCTCATAATTCGCGCCTTGA
CCGCATTTTTTAAAAAAAATCATACATGAATAGAAATTCAAGCATATCGATATCGATGTCGATATGGGTTGGAAAAGGAAGAGGGGAAAAGAACCACCAT
CTTCTGAAGAAATTTTTGGTAAGTCTGAATGAATGAAAGAATGATTGTGATTGATTGGTTGCTAAATACACAATTCTTGCACTCGTGTGATGGCATGCTC
ACACTTTGCAAACAACTCTTATTTTGGTTGTGCTGTTTGACTCGATTCAGAGCGAAGGCACTACTAAAAAGCCAAAGCCCGTGCCAATTATCTGCTAATG
ATTGGTGTTCATGTGTGCTTCCTCTTTTTGGCCGTCTTGTAGTAGCTGGGAAAAAGTTTTTTGCATCTGATCTCTTTGGATGCTAAAGAATGGCAGCTTT
GCAAACCATCTGAATGATGATTTGCTGCAGAAAAAAAATAAAAGTGTTGGATGGATCAGGAAGTCATGTGTTGGATGAGTGCTTTTTCTAGCCTAGCCCA
AAAGGACCAAAGCAAAAAAGACAGGCAGCTTGTGTACAAATGTACATGTACATGTGCTTCTGATCAAAA